Job Description P03004 Confidence 99.58% Date Thu Jan 5 10:57:49 GMT 2012 Rank 81 Aligned Residues 230 % Identity 20% Template c2v1uA_ PDB info PDB header:replication Chain: A: PDB Molecule:cell division control protein 6 homolog; PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna Resolution 3.10 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																.	.																																									.	.	.	.	.	.	.	.
Query SS confidence																																.	.																																									.	.	.	.	.	.	.	.
Query Sequence		V	N	V	K	H	T	F	D	N	F	V	E	G	K	S	N	Q	L	A	R	A	A	A	R	Q	V	A	D	N	P	.	.	G	G	A	Y	N	P	L	F	L	Y	G	G	T	G	L	G	K	T	H	L	L	H	A	V	G	N	G	I	M	A	R	K	P	N	A	K	V	V	Y	M	.	.	.	.	.	.	.	.
Query Conservation																																.	.																																									.	.	.	.	.	.	.	.
Alig confidence																		.	.	.												.	.																																									.	.	.	.	.	.	.	.
Template Conservation																		.	.	.
Template Sequence		L	L	P	D	Y	V	P	D	V	L	P	H	R	E	A	E	.	.	.	L	R	R	L	A	E	V	L	A	P	A	L	R	G	E	K	P	S	N	A	L	L	Y	G	L	T	G	T	G	K	T	A	V	A	R	L	V	L	R	R	L	E	A	R	A	S	S	L	G	V	L	V	K	P	I	Y	V	N	A	R	H
Template Known Secondary structure			S	T	T				S			T	T					.	.	.							T	T	G	G	G	T	S	S										B		T	T	S	S																				T										T	T	T
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
				202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220														.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure		.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	H	S	E	R	F	V	Q	D	M	V	K	A	L	Q	N	N	A	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	K	R	Y	Y	R	S	V	D	A	L	L	I	D	D	I	Q	F	F	A	N	K	E	R	S	Q	E	E	F	F	H	T	F	N	A	L	L	E	G	N	Q	Q	I	I	L
Query Conservation		.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Conservation																																																																							.	.
Template Sequence		R	E	T	P	Y	R	V	A	S	A	I	A	E	A	V	G	V	R	V	P	F	T	G	L	S	V	G	E	V	Y	E	R	L	V	K	R	L	S	R	L	R	G	I	Y	I	I	V	L	D	E	I	D	F	L	P	K	R	P	G	G	Q	D	L	L	Y	R	I	T	R	.	.	I	N	Q	E	L	V	S	L	V
Template Known Secondary structure		S		S													S					S	S																T	T	S		S								T	T	T					S	T	T											.	.	G	G	G
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																																																				.	.											.	.	.
Query SS confidence																																																				.	.											.	.	.
Query Sequence		T	S	D	R	Y	P	K	E	I	N	G	V	E	D	R	L	K	S	R	F	G	W	G	L	T	V	A	I	E	P	P	E	L	E	T	R	V	A	I	L	M	K	K	A	D	E	N	D	I	R	.	.	L	P	G	E	V	A	F	F	I	A	.	.	.	K	R	L	R	S	N	V	R	E	L	E	G	A	L	N
Query Conservation																																																				.	.											.	.	.
Alig confidence																								.																												.	.											.	.	.
Template Conservation																								.
Template Sequence		G	I	T	N	S	L	G	F	V	E	N	L	E	P	R	V	K	S	S	L	G	E	.	V	E	L	V	F	P	P	Y	T	A	P	Q	L	R	D	I	L	E	T	R	A	E	E	A	F	N	P	G	V	L	D	P	D	V	V	P	L	C	A	A	L	A	A	R	E	H	G	D	A	R	R	A	L	D	L	L	R
Template Known Secondary structure					S		S	T	T	S	S	S	S						T	T	T	T	S	.					B																				B		T	T	T	B		S	S											S	S	S
Template Predicted Secondary structure																								.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		342	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		R	V	I	A	N	A	N	F	T	G	R	A	.	I	T	I	D	F	V	R	E	A	L	R	D	L	L
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		V	A	G	E	I	A	E	R	R	R	E	E	R	V	R	R	E	H	V	Y	S	A	R	A	E	I	E
Template Known Secondary structure										T	T		S		B
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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