Job Description P03004 Confidence 99.85% Date Thu Jan 5 10:57:49 GMT 2012 Rank 34 Aligned Residues 231 % Identity 18% Template c2r65A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cell division protease ftsh homolog; PDBTitle: crystal structure of helicobacter pylori atp dependent protease, ftsh2 adp complex Resolution 3.30 Å

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.								.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.
Query Sequence		N	V	K	H	T	F	D	N	F	V	E	G	K	S	N	Q	L	A	R	A	A	A	R	Q	V	A	D	N	P	.	.	.	.	.	.	.	G	G	A	Y	N	P	L	F	L	Y	G	G	T	G	L	G	K	T	H	L	L	H	A	V	G	N	G	I	M	A	R	K	P	N	A	K	V	V	Y	M	H	S	E	R
Query Conservation																															.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.																													.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.
Template Sequence		K	P	N	V	R	F	K	D	M	A	G	N	E	E	A	K	E	E	V	V	E	I	V	D	F	L	K	Y	P	E	R	Y	A	N	L	G	A	K	I	P	K	G	V	L	L	V	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	G	E	A	.	.	.	.	.	H	V	P	F	F	S	M	G	G	S	S
Template Known Secondary structure							G	G	G	S		S							T	T									S						T	T	T					S							S	S	S	S	S													.	.	.	.	.	T								T	G	G
Template Predicted Secondary structure																																																																		.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.						.	.	230	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.					.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																					.																																			.	.	.	.
Query SS confidence																					.																																			.	.	.	.
Query Sequence		F	V	Q	D	M	V	K	A	L	Q	N	N	A	I	E	E	F	K	R	.	Y	Y	R	S	V	D	A	L	L	I	D	D	I	Q	F	F	A	N	K	E	R	S	Q	E	E	F	F	H	T	F	N	A	L	L	.	.	.	.	E	G	N	Q	Q	I	I	L	T	S	D	R	Y	P	K	E	I	N	G	V	E	D
Query Conservation																					.																																			.	.	.	.
Alig confidence																					.																																			.	.	.	.																	.	.	.
Template Conservation																																																																												.	.	.
Template Sequence		F	I	E	M	F	V	G	L	G	A	S	R	V	R	D	L	F	E	T	A	K	K	Q	A	P	S	I	I	F	I	D	E	I	D	A	I	G	K	N	D	E	R	E	Q	T	L	N	Q	L	L	A	E	M	D	G	F	G	S	E	N	A	P	V	I	V	L	A	A	T	N	R	P	E	I	.	.	.	L	D	P
Template Known Secondary structure		G	G	S			S	S	S		S	T	T											T		S						T	T	G	G	G	T						S	T	T	T	S	S	S					T	T			S		S	S	S									S		T	T	S	.	.	.	S		G
Template Predicted Secondary structure																																																																												.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.				.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.																	.
Query SS confidence																																																					.																	.
Query Sequence		R	L	K	S	R	F	G	W	G	L	T	V	A	I	E	P	P	E	L	E	T	R	V	A	I	L	M	K	K	A	D	E	N	D	I	R	L	P	G	E	V	A	F	F	I	A	K	R	L	R	S	.	N	V	R	E	L	E	G	A	L	N	R	V	I	A	N	A	.	N	F	T	G	R	A	I	T	I	D	F
Query Conservation																																																					.																	.
Alig confidence																																										.											.																	.
Template Conservation																																										.
Template Sequence		A	L	M	R	P	G	R	F	D	R	Q	V	L	V	D	K	P	D	F	N	G	R	V	E	I	L	K	V	H	I	K	G	V	K	L	A	N	D	V	N	.	L	Q	E	V	A	K	L	T	A	G	L	A	G	A	D	L	A	N	I	I	N	E	A	A	L	L	A	G	R	N	N	Q	K	E	V	R	Q	Q	H
Template Known Secondary structure		G	G	G	S	T	T	S	S								S															T	T	S				S				.										S			S																				S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	E	A	L	R	D	L	L	A	L	Q	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	E	A	V	E	R	G	I	A	G	L	E	K
Template Known Secondary structure					S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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