Job Description P03004 Confidence 99.83% Date Thu Jan 5 10:57:49 GMT 2012 Rank 41 Aligned Residues 176 % Identity 17% Template c2qgzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative primosome component; PDBTitle: crystal structure of a putative primosome component from2 streptococcus pyogenes serotype m3. northeast structural3 genomics target dr58 Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																				.													.
Query SS confidence																																				.													.
Query Sequence		S	G	W	D	N	V	P	A	P	A	E	P	T	Y	R	S	N	V	N	V	K	H	T	F	D	N	F	V	E	G	K	S	N	Q	.	L	A	R	A	A	A	R	Q	V	A	D	N	.	P	G	G	A	Y	N	P	L	F	L	Y	G	G	T	G	L	G	K	T	H	L	L	H	A	V	G	N	G	I	M	A	R
Query Conservation																																				.													.
Alig confidence																																				.													.
Template Conservation
Template Sequence		Q	K	Q	A	A	I	S	E	R	I	Q	L	V	S	L	P	K	S	Y	R	H	I	H	L	S	D	I	D	V	N	N	A	S	R	M	E	A	F	S	A	I	L	D	F	V	E	Q	Y	P	S	A	E	Q	K	G	L	Y	L	Y	G	D	M	G	I	G	K	S	Y	L	L	A	A	M	A	H	E	L	S	E	K
Template Known Secondary structure										T					S	S		G	G	G	G	S			G	G	G	S				S																		S		S	S									S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	N	A	K	V	V	Y	M	H	S	E	R	F	V	Q	D	M	V	K	A	L	Q	N	N	A	I	E	E	F	K	R	Y	Y	R	S	V	D	A	L	L	I	D	D	I	Q	F	F	A	N	K	E	R	S	Q	E	E	F	F	H	T	F	N	A	L	L	E	G	N	Q	Q	I	I	L	T	S	D	R	Y	P
Query Conservation
Alig confidence			.																										.	.	.	.																.	.	.	.	.
Template Conservation			.																										.	.	.	.																.	.	.	.	.
Template Sequence		K	.	G	V	S	T	T	L	L	H	F	P	S	F	A	I	D	V	K	N	A	I	S	K	E	E	I	.	.	.	.	D	A	V	K	N	V	P	V	L	I	L	D	D	I	G	.	.	.	.	.	A	V	R	D	E	V	L	Q	V	I	L	Q	Y	R	M	L	E	E	L	P	T	F	F	T	S	N	Y	S	F
Template Known Secondary structure		S	.																								T	T	.	.	.	.					T	S	S						T			.	.	.	.	.			T	T	T	T												T								S	S
Template Predicted Secondary structure			.																										.	.	.	.																.	.	.	.	.
Template SS confidence
		180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220						.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		273	.	.	.	.	.					.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure								.	.	.	.											.
Query SS confidence								.	.	.	.											.
Query Sequence		K	E	I	N	G	V	.	.	.	.	E	D	R	L	K	S	R	F	G	W	.	G	L	T	V	A	I	E	P	P	E	L	E
Query Conservation								.	.	.	.											.
Alig confidence								.	.	.	.											.
Template Conservation
Template Sequence		A	D	L	E	R	K	W	A	W	Q	A	K	R	V	M	E	R	V	R	Y	L	A	R	E	F	H	L	E	G	A	N	R	R
Template Known Secondary structure						T	T							S																S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions