Job Description P03004 Confidence 96.95% Date Thu Jan 5 10:57:49 GMT 2012 Rank 277 Aligned Residues 117 % Identity 15% Template c2p6uA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:afuhel308 helicase; PDBTitle: apo structure of the hel308 superfamily 2 helicase Resolution 3.14 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Y	N	P	L	F	L	Y	G	G	T	G	L	G	K	T	H	L	L	H	A	V	G	N	G	I	M	A	R	K	P	N	A	K	V	V	Y	.	M	H	S	E	R	F	V	Q	D	M	V	K	A	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.
Template Sequence		S	G	K	N	L	L	L	A	M	P	T	A	A	G	K	T	L	L	A	E	M	A	M	V	R	E	A	I	K	.	.	G	G	K	S	L	Y	V	V	P	L	R	A	L	A	G	E	K	Y	E	S	F	K	K	W	E	K	I	G	L	R	I	G	I	S	T	G	D	Y	E	S	R	D	E	H	L	G	D	C	D
Template Known Secondary structure		T		S							S	S																			.	.	T								S	S												G	G	G	G	T	T	T								S			S				T	T	G	G	G		S
Template Predicted Secondary structure																															.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
											216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	N	N	A	I	E	E	F	K	R	Y	Y	R	S	V	D	A	L	L	I	D	D	I	Q	F	F	A	N	K	E	R	S	Q	E	E	F	F	H	T	F	N	A	L	L	E	G	N	Q	Q	I	I	L	T	S	D	R	Y	P	K	E	I	N	G	V	E	D	R	L
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	V	T	T	S	E	K	A	D	S	L	I	R	N	R	A	S	W	I	K	A	V	S	C	L	V	V	D	E	I	H	L	L	D	S	E	K	R	G	A	T	L	E	I	L	V	T	K	M	R	R	M	N	K	A	L	R	V	I	G	L	S	A	T	A	P	N	V	T	E	I	A	E	W	L
Template Known Secondary structure																T	T		S	S	G	G	G							T	T	G	G	G	G	G		T	T	T																T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions