Return to main results Retrieve Phyre Job Id

Job DescriptionP03004
Confidence95.96%DateThu Jan 5 10:57:49 GMT 2012
Rank414Aligned Residues120
% Identity16%Templatec2oxcA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:probable atp-dependent rna helicase ddx20; PDBTitle: human dead-box rna helicase ddx20, dead domain in complex2 with adp
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   165....170.........180... ......190.........200.........210.........220
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Query Sequence  YNPLFLYGGTGLGKTHLLH. AVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNAIE. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRL
Template Known Secondary structure  T



TTSS

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SSTTTSTT


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T
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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   221........230.........240.........250.........260.........270.........280..
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Query Sequence  . . . . . . . . . . . . . . . . . . EFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRL
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Template Sequence  KKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSL. PASKQMLAVSATYPEFLANALTKY
Template Known Secondary structure  TS
S
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GGG

SSSTTSSS.
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   179180.........190.........200.........210.........220.........230... ......240.........250.......
 
   283..
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Query Sequence  KSR
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Template Sequence  MRD
Template Known Secondary structure 
SS
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   258.260
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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