Job Description P03004 Confidence 97.06% Date Thu Jan 5 10:57:49 GMT 2012 Rank 258 Aligned Residues 78 % Identity 17% Template c2krkA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:26s protease regulatory subunit 8; PDBTitle: solution nmr structure of 26s protease regulatory subunit 82 from h.sapiens, northeast structural genomics consortium3 target target hr3102a Resolution UNK

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		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.																							.
Query SS confidence																																										.																							.
Query Sequence		V	A	I	E	P	P	E	L	E	T	R	V	A	I	L	M	K	K	A	D	E	N	D	I	R	L	P	G	E	V	A	F	F	I	A	K	R	L	R	S	.	N	V	R	E	L	E	G	A	L	N	R	V	I	A	N	A	N	F	T	G	R	A	.	I	T	I	D	F	V	R	E	A	L	R	D	L	L	A	L
Query Conservation																																										.																							.
Alig confidence																															.											.																							.
Template Conservation																															.
Template Sequence		H	H	H	S	H	P	N	E	E	A	R	L	D	I	L	K	I	H	S	R	K	M	N	L	T	R	G	I	N	.	L	R	K	I	A	E	L	M	P	G	A	S	G	A	E	V	K	G	V	C	T	E	A	G	M	Y	A	L	R	E	R	R	V	H	V	T	Q	E	D	F	E	M	A	V	A	K	V	M	Q	K
Template Known Secondary structure																				T	T	T	S				T	T			.							T		S	S																				T	T		S
Template Predicted Secondary structure																															.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		370
Predicted Secondary structure
Query SS confidence
Query Sequence		Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		85

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions