Job Description P03004 Confidence 96.88% Date Thu Jan 5 10:57:49 GMT 2012 Rank 291 Aligned Residues 116 % Identity 16% Template c2gedB_ PDB info PDB header:protein transport, signaling protein Chain: B: PDB Molecule:signal recognition particle receptor beta PDBTitle: signal recognition particle receptor beta-subunit in2 nucleotide-free dimerized form Resolution 2.20 Å

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		163	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.																																																																.	.
Query SS confidence							.																																																																.	.
Query Sequence		G	A	Y	N	P	.	L	F	L	Y	G	G	T	G	L	G	K	T	H	L	L	H	A	V	G	N	G	I	M	A	R	K	P	N	A	K	V	V	Y	M	H	S	E	R	F	V	Q	D	M	V	K	A	L	Q	N	N	A	I	E	E	F	K	R	Y	Y	R	S	V	D	.	.	A	L	L	I	D	D	I	Q	F
Query Conservation							.																																																																.	.
Alig confidence							.																						.	.																	.	.	.	.	.	.	.																		.	.
Template Conservation																													.	.																	.	.	.	.	.	.	.
Template Sequence		K	L	Y	Q	P	S	I	I	I	A	G	P	Q	N	S	G	K	T	S	L	L	T	L	L	T	A	D	.	.	Y	D	G	S	G	V	T	L	V	D	F	P	G	H	V	K	.	.	.	.	.	.	.	L	R	Y	K	L	S	D	Y	L	K	T	R	A	K	F	V	K	G	L	I	F	M	V	D	S	T	V	D
Template Known Secondary structure														T	T	S	S												.	.				T	T		S				T	T	T				.	.	.	.	.	.	.		S											G	G	G										S	S
Template Predicted Secondary structure																													.	.																	.	.	.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.								.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		F	A	N	K	E	R	S	Q	E	E	F	F	H	T	F	.	.	.	N	A	L	L	E	G	N	Q	Q	I	I	L	T	S	D	R	Y	P	K	E	I	N	G	V	E	D	R	L	K	S	R	F	G
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		P	K	K	L	T	T	T	A	E	F	L	V	D	I	L	S	I	T	E	S	S	C	E	N	G	I	D	I	L	I	A	C	N	K	S	E	L	F	T	A	R	P	P	S	K	I	K	D	A	L	E
Template Known Secondary structure																							S	T	T											T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions