Job Description P03004 Confidence 96.65% Date Thu Jan 5 10:57:49 GMT 2012 Rank 337 Aligned Residues 94 % Identity 19% Template c2b8tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: crystal structure of thymidine kinase from u.urealyticum in2 complex with thymidine Resolution 2.00 Å

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		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																											.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	L	Y	G	G	T	G	L	G	K	T	H	L	L	H	A	V	G	N	G	I	M	A	R	K	P	N	A	K	V	V	Y	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	E	R	F	V	Q	D	M	V	K	A	L	Q	N	N	A	I	E	E	F
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																										.	.																																																		.	.	.	.	.
Template Sequence		F	I	T	G	P	M	F	A	G	K	T	A	E	L	I	R	R	L	H	R	L	E	Y	A	.	.	D	V	K	Y	L	V	F	K	P	K	I	D	T	R	S	I	R	N	I	Q	S	R	T	G	T	S	L	P	S	V	E	V	E	S	A	P	E	I	L	N	Y	I	M	S	N	S	F	N	D	.	.	.	.	.
Template Known Secondary structure						S	T	T	S																T	.	.	T												G	G	G		S	S								S	S						S	S	T									S	T	T	S		T	.	.	.	.	.
Template Predicted Secondary structure																										.	.																																																		.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	Y	Y	R	S	V	D	A	L	L	I	D	D	I	Q	F	F	A	N	K	E	R	S	Q	E	E	F	F	H	T	F	N	A	L	L	E	G	N	Q	Q	I	I	L	T	S	D	R	Y	P	K	E	I	N	G	V	E	D
Query Conservation
Alig confidence		.	.	.	.	.																	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	E	T	K	V	I	G	I	D	E	V	Q	F	F	D	D	R	.	.	.	.	.	.	I	C	E	V	A	N	I	L	A	E	N	G	F	V	V	I	I	S	G	L	D	K	N	F	K	G	E	P	F	G	P
Template Known Secondary structure		.	.	.	.	.	T								S	G	G	G	S		T		.	.	.	.	.	.											T	T									S	B		T	T	S	S	B		T	T
Template Predicted Secondary structure		.	.	.	.	.																	.	.	.	.	.	.
Template SS confidence
							89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions