Job Description P03004 Confidence 98.04% Date Thu Jan 5 10:57:49 GMT 2012 Rank 121 Aligned Residues 173 % Identity 13% Template c2a5yB_ PDB info PDB header:apoptosis Chain: B: PDB Molecule:ced-4; PDBTitle: structure of a ced-4/ced-9 complex Resolution 2.60 Å

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		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.							.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.															.	.	.	.	.	.
Query SS confidence																																												.	.	.	.															.	.	.	.	.	.
Query Sequence		N	Q	L	A	R	A	A	A	R	Q	V	A	D	N	P	G	G	A	Y	N	P	L	F	L	Y	G	G	T	G	L	G	K	T	H	L	L	H	A	V	G	N	G	.	.	.	.	I	M	A	R	K	P	N	A	K	V	V	Y	M	H	.	.	.	.	.	.	S	E	R	F	V	Q	D	M	V	K	A	L	Q	N
Query Conservation																																												.	.	.	.															.	.	.	.	.	.
Alig confidence																																												.	.	.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		E	Y	H	V	D	R	V	I	K	K	L	D	E	M	C	D	L	D	S	F	F	L	F	L	H	G	R	A	G	S	G	K	S	V	I	A	S	Q	A	L	S	K	S	D	Q	L	I	G	I	N	Y	D	S	I	V	W	L	K	D	S	G	T	A	P	K	S	T	F	D	L	F	T	D	I	L	L	M	L	K	S
Template Known Secondary structure																T	T	S	S	S								S	T	T	S	S													S	S	T	B	T	T	T	B	S											S	T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		217	.																		.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	E	F	K	R	Y	Y	R	S	V	D	.	A	L	L	I	D	D	I	Q	F	F	A	N	K	E	R	S	Q	E	E	F	F	H	T	F	N	A	L	L	E	G	N	Q	Q	I	I	L	T	S	D	R	Y	P	K	E	I	N	G	V
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.											.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Sequence		E	D	D	L	L	N	F	P	S	V	E	H	V	T	S	V	V	L	K	R	M	I	C	N	A	L	I	D	R	P	N	T	L	F	V	F	D	D	V	V	Q	E	.	.	.	.	.	.	.	.	.	.	.	E	T	I	R	W	A	Q	E	L	R	L	R	C	L	V	T	T	R	D	.	.	.	.	.	V	E	I
Template Known Secondary structure		T	S			T	T					T	T															T	T	S	T	T												.	.	.	.	.	.	.	.	.	.	.									T	T								S	B	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.												.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.						.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	R	L	K	S	R	F	G	W	G	L	T	V	A	I	E	P	P	E	L	E	T	R	V	A	I	L	M	K	K	A	D	E	N	D	I	R	L	P	G	E	V	A	F	F	I	A	K	R	L	R	S	N	V	R	E	L	E	G	A
Query Conservation
Alig confidence											.	.	.																					.
Template Conservation											.	.	.																					.
Template Sequence		S	N	A	A	S	Q	T	C	E	.	.	.	F	I	E	V	T	S	L	E	I	D	E	C	Y	D	F	L	E	A	Y	G	.	M	P	M	P	E	K	E	E	D	V	L	N	K	T	I	E	L	S	S	G	N	P	A	T	L	M	M	F
Template Known Secondary structure		G	G	G			S				.	.	.																			T	S	.																			T	T
Template Predicted Secondary structure											.	.	.																					.
Template SS confidence
		278	.	280	.	.	.	.	.	.				.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions