Job Description P03004 Confidence 96.51% Date Thu Jan 5 10:57:49 GMT 2012 Rank 356 Aligned Residues 146 % Identity 12% Template c1szpC_ PDB info PDB header:dna binding protein Chain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament Resolution 3.25 Å

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		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.					.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.												.
Query SS confidence																																														.	.	.	.												.
Query Sequence		R	A	A	A	R	Q	V	A	D	N	P	G	G	A	Y	N	P	L	F	L	Y	G	G	T	G	L	G	K	T	H	L	L	H	A	V	G	N	G	I	M	A	R	K	P	.	.	.	.	N	A	K	V	V	Y	M	H	S	E	R	.	F	V	Q	D	M	V	K	A	L	Q	N	N	A	I	E	E	F	K	R	Y
Query Conservation																																														.	.	.	.												.
Alig confidence																																														.	.	.	.												.
Template Conservation
Template Sequence		S	K	N	L	D	T	L	L	G	G	G	V	E	T	G	S	I	T	E	L	F	G	E	F	R	T	G	K	S	Q	L	C	H	T	L	A	V	T	C	Q	I	P	L	D	I	G	G	G	E	G	K	C	L	Y	I	D	T	E	G	T	F	R	P	V	R	L	V	S	I	A	Q	R	F	G	L	D	P	D	D	A
Template Known Secondary structure										T	S	S			S	S	S							S	T	T	S	S												T	T	S		T	T	T	T			S	S							S	S	S				G	G	G	G							T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	S	V	D	A	L	L	I	D	D	I	Q	F	F	A	N	K	E	R	S	Q	E	E	F	F	H	T	F	N	A	L	L	E	G	N	Q	Q	I	I	L	T	S	D	R	Y	P	K	E	I	N	G	V	E	D	R	L	K	S	R	F	G	W	G	L	T	V	A	I	E	P	P	E	L	E	T	R	V	A	I
Query Conservation
Alig confidence					.	.											.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.											.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	N	.	.	V	A	Y	A	R	A	Y	N	A	D	.	.	.	.	.	H	Q	L	R	L	L	D	A	A	A	Q	M	M	S	E	S	R	F	S	L	I	V	V	D	S	V	M	A	L	Y	R	E	L	S	A	R	Q	M	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	K	F	M	R	A
Template Known Secondary structure		G	G	G	.	.								S	T	T	.	.	.	.	.									T							S										T	T	G	G	G			T							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.											.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.			.	.	.	250	.	.	.	.	.	.						.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.															.	.	.	.	300	.	.
		306	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	K	K	A	D	E	N	D	I	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	R	L	A	D	Q	F	G	V	A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions