Job Description P03004 Confidence 99.89% Date Thu Jan 5 10:57:49 GMT 2012 Rank 20 Aligned Residues 222 % Identity 23% Template c1iy2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh; PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus Resolution 3.20 Å

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.								.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.
Query Sequence		N	V	K	H	T	F	D	N	F	V	E	G	K	S	N	Q	L	A	R	A	A	A	R	Q	V	A	D	N	P	G	.	.	.	.	.	.	.	G	A	Y	N	P	L	F	L	Y	G	G	T	G	L	G	K	T	H	L	L	H	A	V	G	N	G	I	M	A	R	K	P	N	A	K	V	V	Y	M	H	S	E	R
Query Conservation																																.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.
Template Sequence		A	P	K	V	T	F	K	D	V	A	G	A	E	E	A	K	E	E	L	K	E	I	V	E	F	L	K	N	P	S	R	F	H	E	M	G	A	R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	A	.	.	.	.	.	R	V	P	F	I	T	A	S	G	S	D
Template Known Secondary structure							G	G	G	S	S	S																								T	T													T	T	S	S												T	.	.	.	.	.	T
Template Predicted Secondary structure																																																																		.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.					260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																											.																														.	.	.	.
Query SS confidence																											.																														.	.	.	.
Query Sequence		F	V	Q	D	M	V	K	A	L	Q	N	N	A	I	E	E	F	K	R	Y	Y	R	S	V	D	.	A	L	L	I	D	D	I	Q	F	F	A	N	K	E	R	S	Q	E	E	F	F	H	T	F	N	A	L	L	E	.	.	.	.	G	N	Q	Q	I	I	L	T	S	D	R	Y	P	K	E	I	N	G	V	E	D
Query Conservation																											.																														.	.	.	.
Alig confidence																											.																														.	.	.	.																.	.	.
Template Conservation																																																																												.	.	.
Template Sequence		F	V	E	M	F	V	G	V	G	A	A	R	V	R	D	L	F	E	T	A	K	R	H	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	N	D	E	R	E	Q	T	L	N	Q	L	L	V	E	M	D	G	F	E	K	D	T	A	I	V	V	M	A	A	T	N	R	P	D	I	.	.	.	L	D	P
Template Known Secondary structure					S	T	T	T															T	S		S							T																							T	T			T	T										S		T	T	S	.	.	.	S
Template Predicted Secondary structure																																																																												.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.
Predicted Secondary structure																																																					.																							.
Query SS confidence																																																					.																							.
Query Sequence		R	L	K	S	R	F	G	W	G	L	T	V	A	I	E	P	P	E	L	E	T	R	V	A	I	L	M	K	K	A	D	E	N	D	I	R	L	P	G	E	V	A	F	F	I	A	K	R	L	R	S	.	N	V	R	E	L	E	G	A	L	N	R	V	I	A	N	A	N	F	T	G	R	A	.	I	T	I	D	F
Query Conservation																																																					.																							.
Alig confidence																																										.											.																							.
Template Conservation																																										.
Template Sequence		A	L	L	R	P	G	R	F	D	R	Q	I	A	I	D	A	P	D	V	K	G	R	E	Q	I	L	R	I	H	A	R	G	K	P	L	A	E	D	V	D	.	L	A	L	L	A	K	R	T	P	G	F	V	G	A	D	L	E	N	L	L	N	E	A	A	L	L	A	A	R	E	G	R	R	K	I	T	M	K	D
Template Known Secondary structure					S	T	T	S	S																							T	T	S		B		T	T			.							T		T	T																				T	T			S	B
Template Predicted Secondary structure																																										.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		359	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	E	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	E	A	A
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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