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Job DescriptionP03004
Confidence99.84%DateThu Jan 5 10:57:49 GMT 2012
Rank38Aligned Residues234
% Identity23%Templatec1hqcB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:ruvb; PDBTitle: structure of ruvb from thermus thermophilus hb8
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160.........170.........180.........190.........200.........210.....
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Query Sequence  HTFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQ
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Template Sequence  KTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKPGDLAAILANS.
Template Known Secondary structure 
STTTS
S
SS
S






TT

T


TTT

STT.
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   910.........20.........30.........40.........50.........60.........70.........80.......
 
   216...220.........230.........240.........250...... ...260.........270........
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Query Sequence  NNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNA. . . . . . . . . . . . . . . . . LLEGNQQIILTSDRYPKEINGV
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Template Sequence  . . . . . . . . . . LEEGDILFIDEIHRLS. . RQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRP. . . . GLI
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TT
TTTTS

..S

BSSSSS
B





SS
....SS
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   88.90.........100... ......110.........120.........130.........140........ .150.
 
   279280.........290.........300.........310.........320.........330.........340.........350... ....
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Query Sequence  EDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRA. ITID
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Template Sequence  TAPLLSRF. . GIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEEVITRE
Template Known Secondary structure  S
STTTT
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TTS

B
S
S
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B
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   152....... 160.........170.........180.........190.........200.........210.........220.........
 
   358.360.........370....... ..380........
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Query Sequence  FVREALRDLLALQEKLVTID. NIQKTVAEYYK
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Template Sequence  RALEALAALGLDELGLEKRDREILEVLILRFG
Template Known Secondary structure  T

TT


S
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   230.........240.........250.........260.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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