Job Description P03004 Confidence 99.64% Date Thu Jan 5 10:57:49 GMT 2012 Rank 66 Aligned Residues 240 % Identity 19% Template c1fnnB_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:cell division control protein 6; PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum Resolution 2.00 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																						.																																																									.	.	.
Query SS confidence																						.																																																									.	.	.
Query Sequence		Y	R	S	N	V	N	V	K	H	T	F	D	N	F	V	E	G	K	S	N	.	Q	L	A	R	A	A	A	R	Q	V	A	D	N	P	G	G	A	Y	N	P	L	F	L	Y	G	G	T	G	L	G	K	T	H	L	L	H	A	V	G	N	G	I	M	A	R	K	P	N	A	K	V	V	Y	M	H	S	.	.	.
Query Conservation																						.																																																									.	.	.
Alig confidence																						.																																															.										.	.	.
Template Conservation																																																																					.
Template Sequence		D	D	S	V	F	S	P	S	Y	V	P	K	R	L	P	H	R	E	Q	Q	L	Q	Q	L	D	I	L	L	G	N	W	L	R	N	P	G	H	H	Y	P	R	A	T	L	L	G	R	P	G	T	G	K	T	V	T	L	R	K	L	W	E	L	Y	K	D	K	T	.	T	A	R	F	V	Y	I	N	G	F	I	Y
Template Known Secondary structure			G	G	G	G	S	T	T				S			T	T																		S		B	S	S										T	T	S	S													T	T	S		.									T	T	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.
					204	.	.	.	.	.	210	.	.	.	.	.	.	.	.														.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	E	R	F	V	Q	D	M	V	K	A	L	Q	N	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	E	F	K	R	Y	Y	R	S	V	D	A	L	L	I	D	D	I	Q	F	F	A	N	K	E	R	S	Q	E	E	F	F	H	T	F	N	A	L	L	E	G	N	Q	Q	I	I	L	T
Query Conservation		.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	N	F	T	A	I	I	G	E	I	A	R	S	L	N	I	P	F	P	R	R	G	L	S	R	D	E	F	L	A	L	L	V	E	H	L	R	E	R	D	L	Y	M	F	L	V	L	D	D	A	F	N	L	A	P	D	I	L	S	T	F	I	R	L	G	Q	E	A	D	K	L	G	A	F	R	I	A	L	V	I
Template Known Secondary structure			S													T					S	S																		T	T									T	G	G	G	S												T	T						S	S	B
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.										.	330	.	.	.	.	.	.
Predicted Secondary structure																																															.	.																	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.																	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	R	Y	P	K	E	I	N	G	V	E	D	R	L	K	S	R	F	G	W	G	L	T	V	A	I	E	P	P	E	L	E	T	R	V	A	I	L	M	K	K	A	D	E	.	.	N	D	I	R	L	P	G	E	V	A	F	F	I	A	K	R	.	.	.	.	.	.	.	.	.	L	R	S	N	V	R	E	L
Query Conservation																																															.	.																	.	.	.	.	.	.	.	.	.
Alig confidence																						.																									.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence		V	G	H	N	D	A	V	L	N	N	L	D	P	S	T	R	G	I	M	G	.	K	Y	V	I	R	F	S	P	Y	T	K	D	Q	I	F	D	I	L	L	D	R	A	K	A	G	L	A	E	G	S	Y	S	E	D	I	L	Q	M	I	A	D	I	T	G	A	Q	T	P	L	D	T	N	R	G	D	A	R	L	A
Template Known Secondary structure				S	S	T					T	S									T	.	T									B																B		T	T	S	S													S	B	S	S	T	T		T	T
Template Predicted Secondary structure																						.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		E	G	A	L	N	R	V	I	A	N	A	N	F	T	G	R	A	.	I	T	I	D	F	V	R	E	A	L	R	D	L	L	A	L
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		I	D	I	L	Y	R	S	A	Y	A	A	Q	Q	N	G	R	K	H	I	A	P	E	D	V	R	K	S	S	K	E	V	L	F	G
Template Known Secondary structure															T	T		S	S														S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions