Job Description P03004 Confidence 96.56% Date Thu Jan 5 10:57:49 GMT 2012 Rank 352 Aligned Residues 112 % Identity 16% Template c1cz7C_ PDB info PDB header:contractile protein Chain: C: PDB Molecule:microtubule motor protein ncd; PDBTitle: the crystal structure of a minus-end directed microtubule2 motor protein ncd reveals variable dimer conformations Resolution 2.90 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	K	Y	L	N	N	I	N	G	L	L	T	S	F	C	G	A	D	A	P	Q	L	R	F	E	V	G	T	K	P	V	T	Q	T	P	Q	A	A	V	T	S	N	V	A	A	P	A	Q	V	A	Q	T	Q	P	Q	R	A	A	P	S	T	R	S	G	W	D	N	V	P	A	P	A	E	P	T	Y	R	S	N
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	N	M	E	R	K	E	L	H	N	T	V	M	D	L	R	G	N	I	R	V	F	C	R	I	R	P	P	L	E	S	E	E	N	R	M	C	C	T	W	T	Y	H	D	E	S	T	V	E	L	Q	S	I	D	A	Q	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	M
Template Known Secondary structure																			S												T	T	S	T	T	S		B				B			S	T	T							S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.																				.	390	.
		132	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure											.																											.
Query SS confidence											.																											.
Query Sequence		V	N	V	K	H	T	F	D	N	.	F	V	E	G	K	S	N	Q	L	A	R	A	A	A	R	Q	V	A	D	N	P	G	G	A	Y	N	.	P	L	F	L	Y	G	G	T	G	L	G	K	T	H	L	L
Query Conservation											.																											.
Alig confidence											.																											.
Template Conservation
Template Sequence		G	Q	Q	I	F	S	F	D	Q	V	F	H	P	L	S	S	Q	S	D	I	F	E	M	V	S	P	L	I	Q	S	A	L	D	G	Y	N	I	C	I	F	A	Y	G	Q	T	G	S	G	K	T	Y	T	M
Template Known Secondary structure									S					T	T																			T	T										S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions