Job Description P03004 Confidence 96.50% Date Thu Jan 5 10:57:49 GMT 2012 Rank 360 Aligned Residues 97 % Identity 19% Template c1cu1B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:protein (protease/helicase ns3); PDBTitle: crystal structure of an enzyme complex from hepatitis c2 virus Resolution 2.50 Å

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																						.	.	.	.	.	.	.	.	.	190	.															.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	Y	N	P	L	F	L	Y	G	G	T	G	L	G	K	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	H	A	V	G	N	G	I	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	P	N	A	K	V	V	Y	M	H	S	E	R	F	V
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	S	F	Q	V	A	H	L	H	A	P	T	G	S	G	K	S	T	K	V	P	A	A	Y	A	A	Q	G	Y	K	V	L	V	L	N	P	S	V	A	A	T	L	G	F	G	A	Y	M	S	K	A	H	G	I	D	P	N	I	R	T	G	V	R	T	I	T	T	G	A	P	V	T	Y	S	T	Y	G	K	F	L
Template Known Secondary structure		S	S										T	T	S		T	T	T									T	T								S																									S	S								S
Template Predicted Secondary structure
Template SS confidence
		1195	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		Q	D	M	V	K	A	L	Q	N	N	A	I	E	E	F	K	R	Y	Y	R	S	V	D	A	L	L	I	D	D	I	Q	F	F	A	N	K	E	R	S	Q	E	E	F	F	H	T	F	N	A	L	L	E	G	N	Q	Q	.	.	I	I	L	T	S	D	R	Y	P	K	E
Query Conservation																																																										.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.																					.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		A	D	G	.	.	.	.	.	.	.	.	.	.	.	.	G	C	S	G	G	A	Y	D	I	I	I	C	D	E	C	H	S	T	.	.	.	D	S	T	T	I	L	G	I	G	T	V	L	D	Q	A	E	T	A	G	A	R	L	V	V	L	A	T	A	T	P	P	G	S
Template Known Secondary structure			T	T	.	.	.	.	.	.	.	.	.	.	.	.	S			T	T	S		S					T	T	T	T			.	.	.	S														T	T	T	T	T		S							S	S		T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
		1275	.	.													.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.				.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions