Email l.a.kelley@imperial.ac.uk Description P0AD07 Date Thu Jan 5 11:19:36 GMT 2012 Unique Job ID 4cf5ea5bb7b75f03

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2oxlA_ 58.9 20 PDB header:gene regulation Chain: A: PDB Molecule:hypothetical protein ymgb; PDBTitle: structure and function of the e. coli protein ymgb: a protein critical2 for biofilm formation and acid resistance 2 c2dt7A_ 39.7 33 PDB header:rna binding protein Chain: A: PDB Molecule:splicing factor 3a subunit 3; PDBTitle: solution structure of the second surp domain of human2 splicing factor sf3a120 in complex with a fragment of3 human splicing factor sf3a60 3 c3cl3D_ 32.2 39 PDB header:viral protein/signaling protein Chain: D: PDB Molecule:nf-kappa-b essential modulator; PDBTitle: crystal structure of a vflip-ikkgamma complex: insights2 into viral activation of the ikk signalosome 4 c2k6oA_ 16.8 32 PDB header:antimicrobial protein Chain: A: PDB Molecule:cathelicidin antimicrobial peptide; PDBTitle: human ll-37 structure 5 c2fcgF_ 15.2 38 PDB header:antimicrobial protein Chain: F: PDB Molecule:antibacterial protein fall-39, core peptide; PDBTitle: solution structure of the c-terminal fragment of human ll-37 6 c1ij2C_ 13.4 40 PDB header:transcription Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position 7 c1ztaA_ 13.3 47 PDB header:dna-binding motif Chain: A: PDB Molecule:leucine zipper monomer; PDBTitle: the solution structure of a leucine-zipper motif peptide 8 c1ij2B_ 12.5 40 PDB header:transcription Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position 9 c1ij3B_ 12.1 40 PDB header:transcription Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position 10 c1ij3C_ 12.1 40 PDB header:transcription Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position 11 c1rb6C_ 12.0 40 PDB header:dna binding protein Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: antiparallel trimer of gcn4-leucine zipper core mutant as2 n16a tetragonal form 12 c3k7zB_ 12.0 40 PDB header:dna binding protein Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 13 c3k7zA_ 12.0 40 PDB header:dna binding protein Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 14 c1rb1A_ 12.0 40 PDB header:dna binding protein Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 15 c1rb1B_ 12.0 40 PDB header:dna binding protein Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 16 c1swiA_ 11.4 40 PDB header:leucine zipper Chain: A: PDB Molecule:gcn4p1; PDBTitle: gcn4-leucine zipper core mutant as n16a complexed with2 benzene 17 c2l5gA_ 11.4 31 PDB header:transcription regulator Chain: A: PDB Molecule:g protein pathway suppressor 2; PDBTitle: co-ordinates and 1h, 13c and 15n chemical shift assignments for the2 complex of gps2 53-90 and smrt 167-207 18 d1gh6a_ 9.7 20 Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain 19 c2l6lA_ 9.5 27 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily c member 24; PDBTitle: solution structure of human j-protein co-chaperone, dph4 20 c1ce0B_ 9.5 33 PDB header:hiv-1 envelope protein Chain: B: PDB Molecule:protein (leucine zipper model h38-p1); PDBTitle: trimerization specificity in hiv-1 gp41: analysis with a2 gcn4 leucine zipper model 21 c2ovcA_ not modelled 9.4 64 PDB header:transport protein Chain: A: PDB Molecule:potassium voltage-gated channel subfamily kqt member 4; PDBTitle: crystal structure of a coiled-coil tetramerization domain from kv7.42 channels 22 d2bcgg2 not modelled 8.9 21 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:GDI-like N domain 23 c2khfA_ not modelled 8.7 20 PDB header:antimicrobial protein Chain: A: PDB Molecule:plnj; PDBTitle: plantaricin j in dpc-micelles 24 c2w0cR_ not modelled 8.4 71 PDB header:virus Chain: R: PDB Molecule:protein p3; PDBTitle: x-ray structure of the entire lipid-containing2 bacteriophage pm2 25 c2voiB_ not modelled 8.2 33 PDB header:apoptosis Chain: B: PDB Molecule:bh3-interacting domain death agonist p13; PDBTitle: structure of mouse a1 bound to the bid bh3-domain 26 d1nz6a_ not modelled 8.2 45 Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain 27 c2o37A_ not modelled 8.1 27 PDB header:chaperone Chain: A: PDB Molecule:protein sis1; PDBTitle: j-domain of sis1 protein, hsp40 co-chaperone from2 saccharomyces cerevisiae. 28 c2g7rA_ not modelled 7.7 29 PDB header:hydrolase Chain: A: PDB Molecule:mucosa-associated lymphoid tissue lymphoma translocation PDBTitle: x-ray structure of the death domain of the human mucosa associated2 lymphoid tissue lymphoma translocation protein 1 29 c3ag7A_ not modelled 7.2 11 PDB header:plant protein Chain: A: PDB Molecule:putative uncharacterized protein f9e10.5; PDBTitle: an auxilin-like j-domain containing protein, jac1 j-domain 30 c2ys8A_ not modelled 7.2 27 PDB header:protein binding Chain: A: PDB Molecule:rab-related gtp-binding protein rabj; PDBTitle: solution structure of the dnaj-like domain from human ras-2 associated protein rap1 31 c2l06A_ not modelled 7.0 86 PDB header:protein binding Chain: A: PDB Molecule:phycobilisome lcm core-membrane linker polypeptide; PDBTitle: solution nmr structure of the pbs linker polypeptide domain (fragment2 254-400) of phycobilisome linker protein apce from synechocystis sp.3 pcc 6803. northeast structural genomics consortium target sgr209c 32 c2guzO_ not modelled 6.8 36 PDB header:chaperone, protein transport Chain: O: PDB Molecule:mitochondrial import inner membrane translocase PDBTitle: structure of the tim14-tim16 complex of the mitochondrial2 protein import motor 33 c2ochA_ not modelled 6.8 36 PDB header:chaperone Chain: A: PDB Molecule:hypothetical protein dnj-12; PDBTitle: j-domain of dnj-12 from caenorhabditis elegans 34 c2ctrA_ not modelled 6.6 36 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily b member 9; PDBTitle: solution structure of j-domain from human dnaj subfamily b2 menber 9 35 c2ky4A_ not modelled 6.4 56 PDB header:photosynthesis Chain: A: PDB Molecule:phycobilisome linker polypeptide; PDBTitle: solution nmr structure of the pbs linker domain of phycobilisome2 linker polypeptide from anabaena sp. northeast structural genomics3 consortium target nsr123e 36 d1fd3a_ not modelled 6.4 67 Fold:Defensin-like Superfamily:Defensin-like Family:Defensin 37 c2xzrA_ not modelled 6.3 24 PDB header:cell adhesion Chain: A: PDB Molecule:immunoglobulin-binding protein eibd; PDBTitle: escherichia coli immunoglobulin-binding protein eibd 391-438 fused2 to gcn4 adaptors 38 c2dn9A_ not modelled 6.3 55 PDB header:apoptosis, chaperone Chain: A: PDB Molecule:dnaj homolog subfamily a member 3; PDBTitle: solution structure of j-domain from the dnaj homolog, human2 tid1 protein 39 c2khgA_ not modelled 6.3 20 PDB header:antimicrobial protein Chain: A: PDB Molecule:plnj; PDBTitle: plantaricin j in tfe 40 d1xbla_ not modelled 6.1 27 Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain 41 c1bq0A_ not modelled 6.1 27 PDB header:chaperone Chain: A: PDB Molecule:dnaj; PDBTitle: j-domain (residues 1-77) of the escherichia coli n-terminal2 fragment (residues 1-104) of the molecular chaperone dnaj,3 nmr, 20 structures 42 c2d96A_ not modelled 6.0 29 PDB header:transcription Chain: A: PDB Molecule:nuclear factor nf-kappa-b p100 subunit; PDBTitle: solution structure of the death domain of nuclear factor nf-2 kappa-b p100 43 d1fafa_ not modelled 6.0 36 Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain 44 d1ni7a_ not modelled 5.8 20 Fold:SufE/NifU Superfamily:SufE/NifU Family:SufE-like 45 d1qmga2 not modelled 5.8 28 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 46 c2ctqA_ not modelled 5.7 27 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily c member 12; PDBTitle: solution structure of j-domain from human dnaj subfamily c2 menber 12 47 c2pjwV_ not modelled 5.7 22 PDB header:endocytosis/exocytosis Chain: V: PDB Molecule:vacuolar protein sorting-associated protein 27; PDBTitle: the vps27/hse1 complex is a gat domain-based scaffold for2 ubiquitin-dependent sorting 48 d1e3ha6 not modelled 5.6 17 Fold:Ribonuclease PH domain 2-like Superfamily:Ribonuclease PH domain 2-like Family:Ribonuclease PH domain 2-like 49 c2a3dA_ not modelled 5.4 35 PDB header:three-helix bundle Chain: A: PDB Molecule:protein (de novo three-helix bundle); PDBTitle: solution structure of a de novo designed single chain three-2 helix bundle (a3d) 50 c2o7hF_ not modelled 5.4 33 PDB header:transcription Chain: F: PDB Molecule:general control protein gcn4; PDBTitle: crystal structure of trimeric coiled coil gcn4 leucine zipper 51 c2cugA_ not modelled 5.3 36 PDB header:chaperone Chain: A: PDB Molecule:mkiaa0962 protein; PDBTitle: solution structure of the j domain of the pseudo dnaj2 protein, mouse hypothetical mkiaa0962