PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2ky4A_

Fold library id	PDB Header	Molecule	Title
c2ky4A_	PDB header: photosynthesis	Chain: A: PDB Molecule: phycobilisome linker polypeptide;	PDBTitle: solution nmr structure of the pbs linker domain of phycobilisome2 linker polypeptide from anabaena sp. northeast structural genomics3 consortium target nsr123e

Links to external resources
Added to library: Sun Aug 29 00:28:14 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K V F K R V A G I K D K A A I K T L I S A A Y R Q I F E R D I A P Y I A Q N E F S G W E S K L G N G E I T V K E F I E G L G Y S N L Y L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T
T
S
S T S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E F Y T P Y P N T K V I E L G T K H F L G R A P I D Q A E I R K Y N Q I L A T Q G I R A F I N A L V N S Q E Y N E V F G E D T V P Y R R F P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S S
T S S
S T
S S S
S S B
T T

. . . . . . . . .

Sequence T L E H H H H H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	V	F	K	R	V	A	G	I	K	D	K	A	A	I	K	T	L	I	S	A	A	Y	R	Q	I	F	E	R	D	I	A	P	Y	I	A	Q	N	E	F	S	G	W	E	S	K	L	G	N	G	E	I	T	V	K	E	F	I	E	G	L	G	Y	S	N	L	Y	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B			T	T																			T		S											S										T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	F	Y	T	P	Y	P	N	T	K	V	I	E	L	G	T	K	H	F	L	G	R	A	P	I	D	Q	A	E	I	R	K	Y	N	Q	I	L	A	T	Q	G	I	R	A	F	I	N	A	L	V	N	S	Q	E	Y	N	E	V	F	G	E	D	T	V	P	Y	R	R	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S	S	S														T	S	S				S														T											S	S							S		S	S	B						T	T
	.	.	.	.	.	.	.	.	.
Sequence	T	L	E	H	H	H	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T				S