Job Description P39300 Confidence 99.82% Date Thu Jan 5 11:59:05 GMT 2012 Rank 10 Aligned Residues 193 % Identity 19% Template c3zwfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:zinc phosphodiesterase elac protein 1; PDBTitle: crystal structure of human trnase z, short form (elac1). Resolution 1.70 Å

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		39	40	.	.	.	.												.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	M	W	W	L	G	.	.	.	.	.	.	.	.	.	.	.	C	T	G	I	W	L	K	S	E	G	G	T	N	V	C	V	D	F	W	C	G	T	G	K	Q	S	H	G	N	P	L	M	K	Q	G	H	Q	M	Q	R	M	A	G	V	K	K	L	Q	P	N	L	R	T	T	P	F	V	L	D	P	F	A	I
Query Conservation								.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	T	F	L	G	T	G	A	A	Y	P	S	P	T	R	G	A	S	A	V	V	L	R	C	.	E	G	E	C	W	L	F	D	C	G	E	G	T	Q	T	Q	L	M	K	S	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A
Template Known Secondary structure									B	S	S	S			S	S	S		S	S							.	T	T									T	T								S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G
Template Predicted Secondary structure																											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																															.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																												.	.	.	.	.	.	.
Predicted Secondary structure																		.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	I	D	A	V	L	A	T	H	D	H	N	D	H	I	.	D	V	N	V	A	A	A	V	M	Q	N	C	A	D	D	V	P	F	I	G	P	K	T	C	V	D	L	W	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	G	V	P	K	E
Query Conservation																		.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	I	T	K	I	F	I	T	H	L	H	G	D	H	F	F	G	L	P	G	L	L	C	T	I	S	L	Q	S	Q	P	I	E	I	Y	G	P	V	G	L	R	D	F	I	W	R	T	M	E	L	S	H	T	E	L	V	F	H	Y	V	V	H	E	L	V	P	T	A	D	Q	C	P	A	Q	G	R	T	I	L
Template Known Secondary structure		G	G									S	S	G	G	G	T	T	T																					T	T												T	T				S	S											G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		R	C	I	V	V	K	P	G	D	V	V	K	V	K	D	I	E	I	H	A	L	D	A	F	D	R	T	A	L	I	T	L	P	A	D	Q	K	A	A	G	V	L	P	D	G	M	D	D	R	A	V	N	Y	L	F	K	.	.	T	P	G	G	S	L	Y	H	S	G	D	S	H	Y	S	N	Y	Y	A	K	H	G
Query Conservation																																																										.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	S	E	E	N	S	Y	L	L	F	D	D	E	Q	F	V	V	K	A	F	R	L	F	H	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	F	G	F	S	V	V	E	K	K	V	G	R	K	I	C	I	L	G	D	C	S	G	V	V	G	D	G	G	V	K
Template Known Secondary structure			B	T	T	T	T	B							S	S										S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					S		S				S	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.																						.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.						.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		N	E	H	Q	I	D	V	A	L	G	S	Y	G	E	N	P	R	.	.	.	.	.	G	I	T	D	K	M	T	S	A	D	M	L	R	M	G	E	A	L	N	A	K	V	V	I	P	F	H	H	D
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.
Template Conservation
Template Sequence		L	C	F	E	A	D	L	L	I	H	E	A	T	L	D	D	A	Q	M	D	K	A	K	E	H	G	H	S	T	P	Q	M	A	A	T	F	A	K	L	C	R	A	K	R	L	V	L	T	H	F	S
Template Known Secondary structure			T	T	T		S								S		G	G	G							T	T														T	T		S							B
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions