Job Description P39300 Confidence 99.05% Date Thu Jan 5 11:59:05 GMT 2012 Rank 48 Aligned Residues 189 % Identity 18% Template c3l6nA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:metallo-beta-lactamase; PDBTitle: crystal structure of metallo-beta-lactamase ind-7 Resolution 1.65 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	G	C	T	G	I	W	L	K	S	E	G	G	T	N	V	C	V	D	F	W	C	G	T	G	K	Q	S	H	G	N	P	L	M	K	Q	G	H	Q	M	Q	R	M	A	G	V	K	K	L	Q	P	N	L	R	T	T	P	F	V	L	D	P	F	A	I	R	Q	I	D	A	V	L	A	T	H	D	H	N	D
Query Conservation
Alig confidence													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Y	S	A	N	S	M	Y	L	V	T	.	K	K	G	V	V	L	F	D	V	P	W	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	Q	Y	Q	S	L	M	D	T	I	K	K	R	H	N	L	P	V	V	A	V	F	A	T	H	S	H	D	D
Template Known Secondary structure													.	T	T						S			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G													S									S	S	S	S	T	T
Template Predicted Secondary structure													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70																											.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	D	V	N	V	A	A	A	V	M	Q	N	C	A	D	D	V	P	F	I	G	P	K	T	C	V	D	L	W	I	G	W	G	V	P	K	E	R	C	I	V	V	K	P	G	D	V	V	K	V	K	D	I	E	I	H	A	L	D	A	F	D	R	T	A	L	I	T	L	P	A	D	Q	K	A	A	G	V	L
Query Conservation
Alig confidence					.	.	.	.	.																													.																					.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation					.	.	.	.	.																													.																					.	.	.	.	.	.	.	.	.												.	.	.
Template Sequence		R	A	G	.	.	.	.	.	D	L	S	F	F	N	N	K	G	I	K	T	Y	A	T	A	K	T	N	E	F	L	K	K	D	G	K	A	.	T	S	T	E	I	I	K	T	G	K	P	Y	R	I	G	G	E	E	F	V	.	.	.	.	.	.	.	.	.	V	D	F	L	G	E	G	H	T	A	D	.	.	.
Template Known Secondary structure		T	T		.	.	.	.	.		T						T	T																T	T			.			S					T	T	S					T	T					.	.	.	.	.	.	.	.	.							S	S	S	S	S	.	.	.
Template Predicted Secondary structure					.	.	.	.	.																													.																					.	.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
		101	.	.						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.										.	.	.	.	.	.	.	.	160	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		P	D	G	M	D	D	R	A	V	N	Y	L	F	K	T	P	G	G	S	L	Y	H	S	G	D	S	H	Y	S	N	Y	Y	A	K	H	G	N	E	H	Q	I	D	V	A	L	G	S	Y	G	E	N	P	R	G	I	T	D	K	M	T	S	A	D	M	L	R	M	G	E	A	L	.	.	N	A	K	V	V	I	P
Query Conservation																																																																									.	.
Alig confidence		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	N	V	V	V	W	F	P	K	Y	N	V	L	D	G	G	C	L	V	K	S	N	S	A	T	D	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	K	E	A	N	V	E	Q	W	P	K	T	I	N	K	L	K	A	K	Y	S	K	A	T	L	I	I	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.							T	T	T	T						T	T	S			T	T		S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T			T	T	T													T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	H	D	I	W	S	N	F	Q	A	D	P	Q	E	I	R	V	L	W	E	M	K	K	D
Query Conservation
Alig confidence				.	.	.				.	.
Template Conservation				.	.	.				.	.
Template Sequence		G	H	.	.	.	D	E	W	.	.	K	G	G	G	H	V	E	H	T	L	E	L	L	N	K
Template Known Secondary structure		S	B	.	.	.	S			.	.	T	T	S
Template Predicted Secondary structure				.	.	.				.	.
Template SS confidence
		219	220				.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions