Job Description P39300 Confidence 99.23% Date Thu Jan 5 11:59:05 GMT 2012 Rank 40 Aligned Residues 190 % Identity 13% Template c3hnnD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:putative diflavin flavoprotein a 5; PDBTitle: crystal structure of putative diflavin flavoprotein a 5 (fragment 1-2 254) from nostoc sp. pcc 7120, northeast structural genomics3 consortium target nsr435a Resolution 1.80 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		T	G	I	W	L	K	S	E	G	G	T	N	V	C	V	D	F	W	C	G	T	G	K	Q	S	H	G	N	P	L	M	K	Q	G	H	Q	M	Q	R	M	A	G	V	K	K	L	Q	P	N	L	R	T	T	P	F	V	L	D	P	F	A	.	.	.	.	I	R	Q	I	D	A	V	L	A	T	H	D	H	N	D
Query Conservation																																																															.	.	.	.
Alig confidence								.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation								.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	S	Y	V	I	E	.	.	G	D	K	T	A	I	I	D	P	P	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	X	K	I	Y	L	E	A	L	Q	Q	T	V	N	L	K	K	L	D	Y	V	I	L	G	H	F	S	P	N
Template Known Secondary structure								.	.	S	S	S									G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G												S		G	G	G							S	S			G	G
Template Predicted Secondary structure								.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.																															.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		H	I	D	V	N	V	A	A	A	V	M	Q	N	C	A	D	D	V	P	F	I	G	P	K	T	C	V	D	L	W	I	G	.	W	G	V	P	K	E	R	C	I	V	V	K	P	G	D	V	V	K	V	K	D	I	E	I	H	A	L	D	A	F	D	R	T	A	L	I	T	L	P	A	D	Q	K	A	A	G	V
Query Conservation																																		.
Alig confidence						.	.	.																										.																						.	.	.	.	.	.	.	.																	.	.
Template Conservation						.	.	.																																																.	.	.	.	.	.	.	.																	.	.
Template Sequence		R	I	P	T	.	.	.	F	K	A	L	L	E	L	A	P	Q	I	T	F	V	C	S	L	P	A	A	G	D	L	R	A	A	F	P	D	D	N	L	N	I	L	P	X	R	G	K	E	T	L	D	L	G	K	.	.	.	.	.	.	.	.	G	H	V	L	K	F	L	P	I	P	S	P	R	W	P	A	.	.
Template Known Secondary structure		G				.	.	.									T	T																	S	S	S	S									S	S						S	T	.	.	.	.	.	.	.	.	T											S	S		T	T	.	.
Template Predicted Secondary structure						.	.	.																																																.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		92	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.									.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.																	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	D	G	M	D	D	R	A	V	N	Y	L	F	K	T	P	G	G	S	L	Y	H	S	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	Y	S	N	Y	Y	A	K	H	G	N	E	H	Q	I	D	V	A	L	G	S	Y	G	E	N	P	R	G	I	T	D	K	M	T	S	A	D
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	G	L	C	T	Y	D	V	Q	T	Q	I	L	Y	T	D	K	I	F	G	A	H	I	C	G	D	D	V	F	D	D	N	W	E	S	F	K	E	D	Q	R	Y	Y	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	L	X	A	P	H	A	I	H	V	E	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.							T	T	T	T						T	T	T							S		S	B	S	S	S		T	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.															.	.	.	.	.	.	.	210	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		M	L	R	M	G	E	A	L	N	A	K	V	V	I	P	F	H	H	D	I	W	S	N	F	Q	A	D	P	Q	E	I	R	V	L	W	E	M	.	.	K	K	D	R	L	K
Query Conservation																																							.	.
Alig confidence																			.	.	.																		.	.
Template Conservation																			.	.	.
Template Sequence		A	L	E	K	I	S	D	L	Q	V	R	L	Y	A	V	G	H	.	.	.	G	P	L	V	R	T	S	L	I	A	L	T	Q	A	Y	A	D	W	S	K	A	Q	K	L	E
Template Known Secondary structure						T	T	T				S					S	S	.	.	.	S	S	B	B	S	S	S																	T
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions