Job Description P39300 Confidence 98.84% Date Thu Jan 5 11:59:05 GMT 2012 Rank 62 Aligned Residues 212 % Identity 23% Template c2yz3B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:metallo-beta-lactamase; PDBTitle: crystallographic investigation of inhibition mode of the2 vim-2 metallo-beta-lactamase from pseudomonas aeruginosa3 with mercaptocarboxylate inhibitor Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.
Query Sequence		T	F	P	E	W	G	S	W	L	N	E	E	I	E	Q	E	Q	V	A	P	G	T	F	A	M	W	.	.	.	.	.	.	.	.	W	L	G	C	T	G	I	W	L	K	S	E	G	G	T	N	V	C	V	D	F	W	C	G	T	G	K	Q	S	H	G	N	P	L	M	K	Q	G	H	Q	M	Q	R	M	A	G
Query Conservation																												.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.												.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Y	P	T	V	S	E	I	P	V	G	E	V	R	L	Y	Q	I	A	D	G	V	W	S	H	I	A	T	Q	S	F	D	G	A	V	Y	P	S	N	G	L	I	V	R	D	.	G	D	E	L	L	L	I	D	T	A	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						G	G	G	S		T	T									T	T											T	T													.	T	T						S			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.
Predicted Secondary structure																																																																												.	.	.
Query SS confidence																																																																												.	.	.
Query Sequence		V	K	K	L	Q	P	N	L	R	T	T	P	F	V	L	D	P	F	A	I	R	Q	I	D	A	V	L	A	T	H	D	H	N	D	H	I	D	V	N	V	A	A	A	V	M	Q	N	C	A	D	D	V	P	F	I	G	P	K	T	C	V	D	L	W	I	G	W	G	V	P	K	E	R	C	.	.	.	I	V	V
Query Conservation																																																																												.	.	.
Alig confidence		.	.	.	.																																		.	.	.	.	.																																	.	.	.
Template Conservation		.	.	.	.																																		.	.	.	.	.
Template Sequence		.	.	.	.	A	K	N	T	A	A	L	L	A	E	I	E	K	Q	I	G	L	P	V	T	R	A	V	S	T	H	F	H	D	D	R	V	G	.	.	.	.	.	G	V	D	V	L	R	A	A	G	V	A	T	Y	A	S	P	S	T	R	R	L	A	E	V	E	G	N	E	I	P	T	H	S	L	E	G	L	S
Template Known Secondary structure		.	.	.	.															T										S	S	S	S					T	.	.	.	.	.	T							T	T																	T					S					S		S
Template Predicted Secondary structure		.	.	.	.																																		.	.	.	.	.
Template SS confidence
						69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	G	D	V	V	K	V	K	D	I	E	I	H	A	L	D	A	F	D	R	T	A	L	I	T	L	P	A	D	Q	K	A	A	G	V	L	P	D	G	M	D	D	R	A	V	N	Y	L	F	K	T	P	G	G	S	L	Y	H	S	G	D	S	H	Y	S	N	Y	Y	A	K	H	G	N	E	H	Q	I	D	V
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Sequence		S	S	G	D	A	V	R	F	G	P	V	E	L	F	Y	P	G	A	A	H	S	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	V	V	Y	V	P	S	A	S	V	L	Y	G	G	C	A	I	Y	E	L	S	R	T	S	A	G	.	.	.	.	.	.	.
Template Known Secondary structure		S	T	T						T	T								S	S	S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T	T						T	T	S			T	T			S			.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																								.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		A	L	G	S	Y	G	E	N	P	R	G	I	T	D	K	M	T	S	A	D	M	L	R	M	G	E	A	L	.	.	N	A	K	V	V	I	P	F	H	H	D	I	W	S	N	F	Q	A	D	P	Q	E	I	R	V	L	W	E	M	K
Query Conservation																														.	.
Alig confidence		.	.	.	.	.	.	.	.																					.	.										.	.	.				.	.
Template Conservation		.	.	.	.	.	.	.	.																																.	.	.				.	.
Template Sequence		.	.	.	.	.	.	.	.	N	V	A	D	A	D	L	A	E	W	P	T	S	I	E	R	I	Q	Q	H	Y	P	E	A	Q	F	V	I	P	G	H	.	.	.	G	L	P	.	.	G	G	L	D	L	L	K	H	T	T	N	V	V
Template Known Secondary structure		.	.	.	.	.	.	.	.			T	T			T	T	T													T	T		S					S	S	.	.	.	S			.	.	B		T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																.	.	.				.	.
Template SS confidence
										190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions