Job Description P39300 Confidence 98.19% Date Thu Jan 5 11:59:05 GMT 2012 Rank 76 Aligned Residues 163 % Identity 23% Template c2xf4A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:hydroxyacylglutathione hydrolase; PDBTitle: crystal structure of salmonella enterica serovar2 typhimurium ycbl Resolution 2.30 Å

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		43	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		L	G	C	T	G	I	W	L	K	S	E	.	G	G	T	N	V	C	V	D	F	W	C	G	T	G	K	Q	S	H	G	N	P	L	M	K	Q	G	H	Q	M	Q	R	M	A	G	V	K	K	L	Q	P	N	L	R	T	T	P	F	V	L	D	P	F	A	I	R	Q	I	D	A	V	L	A	T	H	D	H	N	D
Query Conservation													.
Alig confidence													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		F	S	Q	N	C	S	L	I	W	C	E	Q	T	R	L	A	A	L	V	D	P	G	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	K	I	K	Q	E	V	D	A	S	G	V	T	.	L	M	Q	I	L	L	T	H	G	H	L	D
Template Known Secondary structure		T	T									T	T	T										S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T			.							S		S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																														.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60
		122	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.													.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure				.																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	I	.	D	V	N	V	A	A	A	V	M	Q	N	C	A	D	D	V	P	F	I	G	P	K	T	C	V	D	L	W	I	.	.	.	.	.	.	.	.	.	.	.	.	G	W	G	V	P	K	E	R	C	I	V	V	K	P	G	D	V	V	K	V	K	D	I	E	I	H	A	L	D	A	F	D	R	T	A	L
Query Conservation				.																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.									.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation													.	.	.	.	.																																																																.
Template Sequence		H	V	G	A	A	S	E	L	A	Q	H	.	.	.	.	.	Y	G	V	P	V	I	G	P	E	K	E	D	E	F	W	L	Q	G	L	P	A	Q	S	R	M	F	G	L	D	E	C	Q	P	L	T	P	D	R	W	L	N	D	G	D	R	V	S	V	G	N	V	T	L	Q	V	L	H	C	P	G	H	T	P	.
Template Known Secondary structure				T	T								.	.	.	.	.		T								G	G	G						T								T	T										S	B				T	T						T	T										S	S	S	T	.
Template Predicted Secondary structure													.	.	.	.	.																																																																.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	L	P	A	D	Q	K	A	A	G	V	L	P	D	G	M	D	D	R	A	V	N	Y	L	F	K	T	P	G	G	S	L	Y	H	S	G	D	S	H	Y	S	N	Y	Y	A	K	H	G	N	E	H	Q	I	D	V	A	L	G	S	Y	G	E	N	P	R	G	I	T	D	K	M	T	S	A	D	M	L	R	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	V	V	F	F	D	E	Q	S	Q	L	L	I	S	G	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	K	G	G	V	G	R	S	D	F	P	R	G	D	H	T	Q	L	I	D	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							T	T	T	T						T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T							S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		269	270	.	.	.	.	.						.	.	.	.	280	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		G	E	A	L	N	A	K	.	.	.	.	.	V	V	I	P	F	H
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.
Template Conservation
Template Sequence		I	K	R	K	L	L	P	L	G	D	D	V	T	F	I	P	G	H
Template Known Secondary structure						T	G	G	G		T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions