Job Description P39300 Confidence 99.15% Date Thu Jan 5 11:59:05 GMT 2012 Rank 46 Aligned Residues 215 % Identity 14% Template c2r2dC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:zn-dependent hydrolases; PDBTitle: structure of a quorum-quenching lactonase (aiib) from agrobacterium2 tumefaciens Resolution 1.75 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	G	T	F	A	M	W	W	L	G	C	T	G	I	W	L	K	S	E	G	G	T	N	V	C	V	D	F	W	C	G	T	G	K	Q	S	H	G	N	P	L	M	K	Q	G	H	Q	M	Q	R	M	A	G	V	K	K	L	Q	P	N	L	R	T	T	P	F	V	L	D	P	F	A	I	R	Q	I	D	A	V
Query Conservation
Alig confidence																									.																																																			.	.	.
Template Conservation																									.																																																			.	.	.
Template Sequence		P	T	V	S	S	R	L	I	D	I	P	V	S	A	Y	L	I	Q	C	T	D	A	T	.	V	L	Y	D	T	G	C	H	P	E	C	M	G	T	N	G	R	W	P	A	Q	S	Q	L	N	A	P	Y	I	G	A	S	E	C	N	L	P	E	R	L	R	Q	L	G	L	S	P	D	D	I	.	.	.	S	T	V
Template Known Secondary structure		T	T																		T	T			.							S		T	T		S	S	T	T		S	S								S		B				T	T		S								T	T			G	G	G		.	.	.	S
Template Predicted Secondary structure																									.																																																			.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.																				.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	T	H	D	H	N	D	H	I	D	V	N	V	A	A	A	V	M	Q	N	C	A	D	D	V	P	F	I	G	P	K	T	C	V	D	L	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	W	G	V	P	K	E	R	C	I	V	V	K	P	G	D	V	V	K	V	K	D
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.
Template Sequence		V	L	S	H	L	H	N	D	H	A	G	.	.	.	.	.	.	.	C	V	E	Y	F	G	K	S	R	L	I	A	H	E	D	E	F	A	T	A	V	R	Y	F	A	T	G	D	H	S	S	P	Y	I	V	K	D	I	E	A	W	L	A	T	P	R	N	W	D	L	V	G	R	D	E	R	E	R	E	L	A	P
Template Known Secondary structure				S			S	T	T	T	S	T	.	.	.	.	.	.	.	T	G	G	G		S	S	S																			T			S	S	S	S									T	T	S									T	T								T
Template Predicted Secondary structure													.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		I	E	I	H	A	L	D	A	F	D	R	T	A	L	I	T	L	P	A	D	Q	K	A	A	G	V	L	P	D	G	M	D	D	R	A	V	N	Y	L	F	K	T	.	P	G	G	S	L	Y	H	S	G	D	S	H	Y	S	N	Y	Y	A	K	H	G	N	E	H	Q	I	D	V	A	L	G	S	Y	G	E	N	P
Query Conservation																																												.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	N	L	L	N	F	G	T	G	H	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	L	G	L	A	V	R	L	E	K	Q	P	G	F	L	L	V	S	D	A	C	Y	T	A	T	N	Y	G	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A
Template Known Secondary structure		T								S	S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									S	S	S								T	T	S							S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.																					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.																.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.							.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.
Query Sequence		R	G	I	T	D	K	M	T	S	A	D	M	L	R	M	G	E	A	L	N	A	.	.	.	.	.	.	K	V	V	I	P	F	H	H	D	I	W	S	N	F	Q	A	D	P	Q	E	I	R	V	L	W	E	M	K	K
Query Conservation																							.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.
Template Sequence		R	R	A	G	V	L	H	D	T	I	G	Y	D	R	T	V	S	H	I	R	Q	Y	A	E	S	R	S	L	T	V	L	F	G	H	.	.	.	.	.	.	.	.	.	D	R	E	Q	F	A	S	L	I	K	S	T	D
Template Known Secondary structure					S	S		S																				T						S	S	.	.	.	.	.	.	.	.	.								S		B	T	T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.										260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions