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Job DescriptionP39300
Confidence98.84%DateThu Jan 5 11:59:05 GMT 2012
Rank61Aligned Residues196
% Identity17%Templatec2cfuA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:sdsa1; PDBTitle: crystal structure of sdsa1, an alkylsulfatase from2 pseudomonas aeruginosa, in complex with 1-decane-sulfonic-3 acid.
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHI. D
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Template Sequence  NITFIRGDSGW. IVVDTLTTPATARAAYELVSRELGER. . . . . . . . . . . . . . . . . . . . . . . . . PIRTVIYSHAHADHFGG
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   124.....130.... .....140.........150.........160 .........170.......
 
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Query Sequence  VNVAAAVMQNCADDVPFIGPKTCVDLWIGW. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GVPKERCIVVKP
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Template Sequence  VRGLVEPQQVASGAVQIIAPAGFMEAAIVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGE
Template Known Secondary structure  GGGT

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Query Sequence  GDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVAL
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Template Sequence  GEDLVLDGVPFT. . . . . . . . . FQNTPGTESPAE. . . . . . . . . . . . MNIWLPRQKALLMAENVVG. TLHNLY. . . . . . . . .
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Query Sequence  GSYGENPRGITDKMTSAD. . . MLRMGEAL. . . NAKVVIPFHHDIWSNFQADPQEIRVLWEMKKDRLKY
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Template Sequence  . . . . . . TLRGAEVRDALGWSKYINQALHRFGRQAEVMFAVHN. . WPRWG. . NAEIVEVLEKQRDLYGY
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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