Job Description P39300 Confidence 99.32% Date Thu Jan 5 11:59:05 GMT 2012 Rank 30 Aligned Residues 182 % Identity 19% Template c1ychD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:nitric oxide reductase; PDBTitle: x-ray crystal structures of moorella thermoacetica fpra.2 novel diiron site structure and mechanistic insights into3 a scavenging nitric oxide reductase Resolution 2.80 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		T	G	I	W	L	K	S	E	G	G	T	N	V	C	V	D	F	W	C	G	T	G	K	Q	S	H	G	N	P	L	M	K	Q	G	H	Q	M	Q	R	M	A	G	V	K	K	L	Q	P	N	L	R	T	T	P	F	V	L	D	P	F	A	.	.	.	.	I	R	Q	I	D	A	V	L	A	T	H	D	H	N	D
Query Conservation																																																															.	.	.	.
Alig confidence								.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation								.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	Y	L	I	V	.	.	D	D	K	T	A	L	V	D	T	V	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	K	E	E	L	I	A	K	L	K	Q	I	K	D	P	V	K	L	D	Y	L	V	V	N	H	T	E	S	D
Template Known Secondary structure								.	.	S	S	S									G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G										T	T	S	S	S				S					S			S
Template Predicted Secondary structure								.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.																															.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		H	I	D	V	N	V	A	A	A	V	M	Q	N	C	A	D	D	V	P	F	I	G	P	K	T	C	V	D	L	W	I	G	.	W	G	V	P	K	E	R	C	I	V	V	K	P	G	D	V	V	K	V	K	D	I	E	I	H	A	L	D	A	F	D	R	T	A	L	I	T	L	P	A	D	Q	K	A	A	G	V
Query Conservation																																		.
Alig confidence						.	.	.																										.																										.	.	.	.	.	.	.	.	.												.	.
Template Conservation						.	.	.																																																				.	.	.	.	.	.	.	.	.												.	.
Template Sequence		H	A	G	A	.	.	.	F	P	A	I	M	E	L	C	P	D	A	H	V	L	C	T	Q	R	A	F	D	S	L	K	A	H	Y	S	H	I	D	F	N	Y	T	I	V	K	T	G	T	S	V	S	L	G	K	R	S	L	T	.	.	.	.	.	.	.	.	.	F	I	E	A	P	M	L	H	W	P	D	.	.
Template Known Secondary structure				T	T	.	.	.									T	T																	T		S										T	T						S	S	S				.	.	.	.	.	.	.	.	.					T	T	S	S	S	T	T	.	.
Template Predicted Secondary structure						.	.	.																																																				.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		86	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140										.	.	.	.	.	.	.	.	.	150	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.																			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	D	G	M	D	D	R	A	V	N	Y	L	F	K	T	P	G	G	S	L	Y	H	S	G	D	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	N	Y	Y	A	K	H	G	N	E	H	Q	I	D	V	A	L	G	S	Y	G	E	N	P	R	G	I	T	D	K	M	T	S
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	S	M	F	T	Y	V	P	E	E	A	L	L	L	P	N	D	A	F	G	Q	H	I	A	T	S	V	R	F	D	D	Q	V	D	A	G	L	I	M	D	E	A	A	K	Y	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	L	M	P	F	S	N	L	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.							G	G	G	T						T	T	T							S			B	G	G	G	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.															.	.	200	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		A	D	M	L	R	M	G	E	.	.	A	L	N	A	K	V	V	I	P	F	H	H	D	I	W	S	N	F	Q	A	D	P	Q	E	I	R	V	L	W	E
Query Conservation										.	.
Alig confidence										.	.												.	.	.
Template Conservation																							.	.	.
Template Sequence		T	K	K	L	D	E	I	Q	K	I	N	L	A	I	K	T	I	A	P	S	H	.	.	.	G	I	I	W	R	K	D	P	G	R	I	I	E	A	Y	A
Template Known Secondary structure											T	T				S					S	S	.	.	.	S		B	B		S
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions