Job Description P39300 Confidence 99.26% Date Thu Jan 5 11:59:05 GMT 2012 Rank 36 Aligned Residues 209 % Identity 14% Template c1e5dA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:rubredoxin\:oxygen oxidoreductase; PDBTitle: rubredoxin oxygen:oxidoreductase (roo) from anaerobe2 desulfovibrio gigas Resolution 2.5 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	I	W	L	K	S	E	G	G	T	N	V	C	V	D	F	W	C	G	T	G	K	Q	S	H	G	N	P	L	M	K	Q	G	H	Q	M	Q	R	M	A	G	V	K	K	L	Q	P	N	L	R	T	T	P	F	V	L	D	P	F	A	I	R	Q	I	D	A	V	L	A	T	H	D	H	N	D	H	I	D	V
Query Conservation
Alig confidence								.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation								.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		N	A	Y	L	V	E	.	.	D	E	K	T	T	L	F	D	T	V	K	A	E	Y	K	G	E	L	L	C	G	I	A	S	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	K	K	I	D	Y	L	V	I	Q	H	L	E	L	D	H	A	G	.
Template Known Secondary structure								.	.	S	S	S									G	G	G										T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G										S					T	.
Template Predicted Secondary structure								.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		36	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																											.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	A	A	A	V	M	Q	N	C	A	D	D	V	P	F	I	G	P	K	T	C	V	D	L	W	I	G	W	G	V	P	K	E	R	C	I	V	V	K	P	G	D	V	V	K	V	K	D	I	E	I	H	A	L	D	A	F	D	R	T	A	L	I	T	L	P	A	D	Q	K	A	A	G	V	L	P	D	G	M
Query Conservation
Alig confidence		.																																																					.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Conservation		.																																																					.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Sequence		.	A	L	P	A	L	I	E	A	C	Q	P	E	K	I	F	T	S	S	L	G	Q	K	A	M	E	S	H	F	H	Y	K	D	W	P	V	Q	V	V	K	H	G	E	T	L	S	L	G	K	R	T	V	T	.	.	.	.	.	.	.	.	.	F	Y	E	T	R	M	L	H	W	P	D	.	.	.	.	.	.	.
Template Known Secondary structure		.	T											S																			S	S								T	T						S	S					.	.	.	.	.	.	.	.	.					T	T	S	S	S	T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																																																					.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template SS confidence
			87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.										.	140	.	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250					.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.																							.	.
Query SS confidence																																															.	.	.	.																							.	.
Query Sequence		D	D	R	A	V	N	Y	L	F	K	T	P	G	G	S	L	Y	H	S	G	D	S	H	Y	S	N	Y	Y	A	K	H	G	N	E	H	Q	I	D	V	A	L	G	S	Y	G	.	.	.	.	E	N	P	R	G	I	T	D	K	M	T	S	A	D	M	L	R	M	G	E	A	L	.	.	N	A	K	V	V	I	P
Query Conservation																																															.	.	.	.																							.	.
Alig confidence		.	.	.	.	.																																									.	.	.	.																							.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	S	M	V	S	W	F	A	D	E	K	V	L	I	S	N	D	I	F	G	Q	N	I	A	A	S	E	R	F	S	D	Q	I	P	V	H	T	L	E	R	A	M	R	E	Y	Y	A	N	I	V	N	P	Y	A	P	Q	T	L	K	A	I	E	T	L	V	G	A	G	V	A	P	E	F	I	C	P
Template Known Secondary structure		.	.	.	.	.							T	T	T	T						T	T	T							S			B	G	G	G	S																	T	G	G	G														T	T				S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	H	D	I	W	S	N	F	Q	A	D	P	Q	E	I	R	V	L	W	E	M	K	K	D	R	L	K	Y	G
Query Conservation
Alig confidence				.	.	.	.
Template Conservation				.	.	.	.
Template Sequence		D	H	.	.	.	.	G	V	I	F	R	G	A	D	Q	C	T	F	A	V	Q	K	Y	V	E	Y	A	E	Q	K
Template Known Secondary structure		S	S	.	.	.	.	S		B			S
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		225	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions