Job Description P15067 Confidence 100.00% Date Thu Jan 5 11:34:29 GMT 2012 Rank 101 Aligned Residues 335 % Identity 14% Template d3dhpa2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.50

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		175	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		T	Y	K	A	L	G	H	P	V	M	I	.	N	Y	L	K	Q	L	G	I	T	A	L	E	L	L	P	V	A	Q	F	A	S	E	P	R	L	Q	R	M	G	L	S	N	Y	W	G	Y	N	P	V	A	M	F	A	L	H	P	A	Y	A	C	S	P	E	T	A	L	D	E	F	R	D	A	I	K	A	L	H	K
Query Conservation													.
Alig confidence							.	.					.																									.	.	.														.										.	.	.	.	.
Template Conservation							.	.																														.	.	.														.										.	.	.	.	.
Template Sequence		R	W	V	D	I	.	.	A	L	E	C	E	R	Y	L	A	P	K	G	F	G	G	V	Q	V	S	P	P	N	E	N	V	A	I	H	N	.	.	.	P	F	R	P	W	W	E	R	Y	Q	P	V	S	.	Y	K	L	C	T	R	S	G	N	.	.	.	.	.	E	D	E	F	R	N	M	V	T	R	C	N	N
Template Known Secondary structure							.	.							T	T	T	T	T	T										S		B	B			T	T	.	.	.	T	T	S		G	G	G	G	G	S	B	S		.	S		S		B	T	T	B		.	.	.	.	.
Template Predicted Secondary structure							.	.																														.	.	.														.										.	.	.	.	.
Template SS confidence
		20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.																												.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	I	E	V	I	L	D	I	V	L	N	H	S	A	E	L	D	L	D	G	P	L	F	S	L	R	G	I	D	N	R	S	Y	Y	W	I	R	E	D	G	D	Y	H	N	W	T	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	T	L
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	V	R	I	Y	V	D	A	V	I	N	H	M	C	G	N	A	V	S	A	G	T	S	S	T	C	G	S	Y	F	N	P	G	S	R	D	F	P	A	V	P	Y	S	G	A	D	F	N	D	G	K	C	K	T	G	S	G	D	I	E	N	Y	N	D	A	T	Q	V	R	D	C	R	L	S	G	L	L	D	L
Template Known Secondary structure		T	T										S					T	T	S		S	B	S		B	T	T				B	B	G	G	G	T	B	B	T	T	T	T	B		G	G	G	B		T	T	T			S	S	S	S	B				T	T								S	B	G	G	G				B
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		N	L	S	H	P	A	V	V	D	Y	A	S	A	C	L	R	Y	W	V	E	T	C	H	V	D	G	F	R	F	D	L	A	A	V	M	G	R	T	P	E	F	R	Q	D	A	P	L	F	T	A	I	Q	N	.	C	P	V	L	S	Q	V	K	L	I	A	E	P	W	D	I	A	P	G	G	Y	Q	V	G	N	F
Query Conservation																																																							.
Alig confidence																					.																																		.
Template Conservation																					.
Template Sequence		A	L	G	K	D	Y	V	R	S	K	I	A	E	Y	M	N	H	L	I	.	D	I	G	V	A	G	F	R	I	D	A	S	K	H	M	A	P	G	D	I	K	A	I	L	D	K	L	H	N	L	N	S	N	W	F	P	E	G	S	K	P	F	I	Y	Q	E	V	I	D	L	G	G	E	P	I	K	S	S	D	Y
Template Known Secondary structure			T	T	S																.			T							T	T	G	G	G	S										T	T						T	T	T	S		T	T													S	S	S	S			G	G	G	G
Template Predicted Secondary structure																					.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	L	F	A	E	W	N	D	H	F	R	D	A	A	R	R	F	W	L	H	Y	D	L	P	L	G	A	F	A	G	R	F	A	A	S	S	D	V	F	K	R	N	G	R	L	P	S	A	A	I	N	L	V	T	A	H	D	G	F	T	L	R	D	C	V	C	F	N	H	K	H	N	E	A	N	G	E	E	N
Query Conservation
Alig confidence																																					.	.	.	.	.																																				.	.	.	.	.
Template Conservation																																					.	.	.	.	.																																				.	.	.	.	.
Template Sequence		F	G	N	G	R	V	T	E	F	K	Y	G	A	K	L	G	T	V	I	R	K	W	N	G	E	K	M	S	A	L	K	N	W	G	E	.	.	.	.	.	G	A	G	F	M	P	S	D	R	A	L	V	F	V	D	N	H	D	N	Q	R	G	H	G	A	G	G	A	S	I	L	T	F	A	D	.	.	.	.	.
Template Known Secondary structure		T	T	T	S																	T		T	T			G	G	G	G	G	G		S	G	.	.	.	.	.	G	G	T				T	T	T					S			T	T	G	G	G	T		T	T			T	T				G	G	G	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.																																				.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.						.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.		.	.	510	.	.	.	.	.	.	.	.	.	520																	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	D	G	T	N	N	N	Y	S	N	N	H	G	K	E	G	L	G	G	S	L	D	L	V	E	R	R	R	D	S	I	H	A	L	L	T	T	L	L	L	S	Q	.	G	T	P	M	L	L	A	G	D	E	H	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	H	G	N	N	N	A
Query Conservation																																												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	L	Y	K	M	A	V	G	F	M	L	A	H	P	Y	G	F	T	R	V	M	S	S	Y	R	W	P	R	Y	F	E	N	G	K	D	V	N	D	W	V	G	P	P	N	D	N	G	V	T	K	E	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														S		S	S								B								T	T			T	T	T	T			S	S			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																													318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	C	Q	D	N	Q	L	T	W	L	D	W	S	Q	A	S	S	G	L	T	A	F	T	A	A	L	I	H	L	R	K	R
Query Conservation
Alig confidence																			.	.
Template Conservation																			.	.
Template Sequence		T	I	N	P	D	T	T	C	G	N	D	W	V	C	E	H	R	.	.	A	R	Q	I	R	N	M	V	N	F	R	N	V
Template Known Secondary structure			B		T	T	S		B		T	T	B			G	G	G	.	.	S
Template Predicted Secondary structure																			.	.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.			.	.	390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions