Return to main results Retrieve Phyre Job Id

Job DescriptionP15067
Confidence100.00%DateThu Jan 5 11:34:29 GMT 2012
Rank99Aligned Residues328
% Identity21%Templated1mxga2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   149150.........160.........170.........180.........190.........200.........210.........220.......
Predicted Secondary structure 



















































.
Query SS confidence 














































































.
Query Sequence  GSTIIYEAHVKGLTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMF.
Query Conservation     



 

  

           


 
     





 


  
 
 

                 


    
 .
Alig confidence 
















........





..



























........









.
Template Conservation     
    
 
      ........    

..   




 


  


 

        ........  

   

  
Template Sequence  EGGVIMQAFYWDVPGGG. . . . . . . . IWWDHI. . RSKIPEWYEAGISAIWLPPPSKGMSGGY. . . . . . . . SMGYDPYDYFD
Template Known Secondary structure  GT




TT


SS........
..T





STTGGG........

SSSTT
Template Predicted Secondary structure 








........

..














........










Template SS confidence 















































































   8.10.........20.... .....30 .........40.........50........ .60.........
 
   228.230.........240.........250.........260.........270. ........280.....
Predicted Secondary structure  ........






















..............











Query SS confidence  . . . . . . . .











































. . . . . . . . . . . . . .













Query Sequence  . . . . . . . . ALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELD. . . . . . . . . . . . . . LDGPLFSLRGIDNR
Query Conservation  ........


  


       


 

  

  

 





 

     ..............              
Alig confidence  ........







.....






























..............













Template Conservation           

   

..... 



 

  

  






 
 

                                 
Template Sequence  LGEYYQKGTVETRFGS. . . . . KEELVRLIQTAHAYGIKVIADVVINHRAGGDLEWNPFVGDYTWTDFSKVASGKYTANYL
Template Known Secondary structure  SS
S
BTTBSS
SS

.....TT


SB



TTTT
TT
TT

S


GG
Template Predicted Secondary structure 















.....







































Template SS confidence 















































































   70.........80..... ....90.........100.........110.........120.........130.........140....
 
   286...290.........300.........310....... ..320.........330.........340.........350.........360..
Predicted Secondary structure 





















...

















Query SS confidence 































. . .












































Query Sequence  SYYWIREDGDYHNWTGCGNTLNLSHPAVVDYA. . . SACLRYWVETCHVDGFRFDLAAVMGRTPEFRQDAPLFTAIQNCPV
Query Conservation          
      
   


  

 

  
...      

 
 





 
 
  
           
   
     
Alig confidence 































...



































.........
Template Conservation                     

          
         

   





 
 
      
        .........
Template Sequence  DFHPNELHCCDEGTFGGFPDICHHKEWDQYWLWKSNESYAAYLRSIGFDGWRFDYVKGYGAWVVRDWLNWW. . . . . . . . .
Template Known Secondary structure  GBSSSSS
S

S


TTS
BB
TTSTSSTTSTT

TTGGGS
.........
Template Predicted Secondary structure 


































.........
Template SS confidence 















































































   145....150.........160.........170.........180.........190.........200.........210.....
 
   363......370.........380.........390.........400.........410.........420.........430.........440..
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  LSQVKLIAEPWDIAPGGYQVGNFPPLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAH
Query Conservation       

 
                     
                        
                  


  
Alig confidence  ..












































.....



























Template Conservation  ..     

                     
                .....                     
 

 

Template Sequence  . . GGWAVGEYWDTNVDALLSWAYESGAKVFDFPLYYKMDEAFDNNNI. . . . . PALVYALQNGQTVVSRDPFKAVTFVANH
Template Known Secondary structure  ..






S
TS
TTT
.....TT
SSTTT
TTTS

S
Template Predicted Secondary structure  ..


















.....







Template SS confidence 















































































   216...220.........230.........240.........250.........260 .........270.........280........
 
   443......450.........460.........470.........480.........490.........500.........510.........520..
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  DGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQGTPMLLAGDEHGHSQ
Query Conservation 
   
 
                                               
 
     
 

 
 

 
 
 
   
Alig confidence 






..............................................


























Template Conservation 
  
   ..............................................   
 




 

 
 





     
Template Sequence  DTDIIWN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KYPAYAFILTYEGQPVIFYRDFEEWLN
Template Known Secondary structure  S



S
..............................................SSSTTS
Template Predicted Secondary structure 


..............................................












Template SS confidence 















































































   289290..... ....300.........310.........320..
 
   523......530.........540.........550.........560.........570.........580.........590.......
Predicted Secondary structure 













































Query SS confidence 










































































Query Sequence  HGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPK
Query Conservation                   
      
    
 

 


  


  
         
                    
Alig confidence  ............................
















........





















Template Conservation  ............................   
  
   
  
  
........             
 
  
   
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . KDKLINLIWIHDHLAGG. . . . . . . . STTIVYYDNDELIFVRNGDSRR
Template Known Secondary structure  ............................T

S........

SS



S

Template Predicted Secondary structure  ............................


........








Template SS confidence 










































































   323......330......... 340.........350.........360.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions