Job Description P15067 Confidence 100.00% Date Thu Jan 5 11:34:29 GMT 2012 Rank 97 Aligned Residues 319 % Identity 17% Template d1g94a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.74

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	K	A	L	G	H	P	V	M	I	N	Y	L	K	Q	L	G	I	T	A	L	E	L	L	P	V	A	Q	F	A	S	E	P	R	L	Q	R	M	G	L	S	N	Y	W	G	Y	N	P	V	A	M	F	A	L	H	P	A	Y	A	C	S	P	E	T	A	L	D	E	F	R	D	A	I	K	A	L	H	K	A
Query Conservation
Alig confidence								.																													.	.	.	.	.	.	.											.									.	.	.	.	.
Template Conservation								.																													.	.	.	.	.	.	.											.									.	.	.	.	.
Template Sequence		N	W	Q	D	V	A	.	Q	E	C	E	Q	Y	L	G	P	K	G	Y	A	A	V	Q	V	S	P	P	N	E	H	I	T	G	S	Q	.	.	.	.	.	.	.	W	W	T	R	Y	Q	P	V	S	Y	.	E	L	Q	S	R	G	G	N	.	.	.	.	.	R	A	Q	F	I	D	M	V	N	R	C	S	A	A
Template Known Secondary structure								.						T					T										S		B	B		S	S	S	.	.	.	.	.	.	.	G	G	G	G	G	S	B	S		S	.		S		B	T	T	B		.	.	.	.	.														T
Template Predicted Secondary structure								.																													.	.	.	.	.	.	.											.									.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.								.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.																	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	E	V	I	L	D	I	V	L	N	H	S	A	E	L	D	L	D	G	P	L	F	S	L	R	G	I	D	N	R	S	Y	Y	W	I	R	E	D	G	D	Y	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	T	G	C	G	N	T	L	N	L	S	H	P	A	V	V	D	Y	A	S
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	D	I	Y	V	D	T	L	I	N	H	M	A	A	G	S	G	T	G	T	A	G	N	S	F	G	N	K	S	F	P	I	Y	S	P	Q	D	F	H	E	S	C	T	I	N	N	S	D	Y	G	N	D	R	Y	R	V	Q	N	C	E	L	V	G	L	A	D	L	D	T	A	S	N	Y	V	Q	N	T	I	A
Template Known Secondary structure		T										S				S	S				B	T	T	S				B	T	T	B		S	S			G	G	G	B					B			T	T												S	B	S	T	T				B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	L	R	Y	W	V	E	T	C	H	V	D	G	F	R	F	D	L	A	A	V	M	G	R	T	P	E	F	R	Q	D	A	P	L	F	T	A	I	Q	N	C	P	V	L	S	Q	V	K	L	I	A	E	P	W	D	I	A	P	G	G	Y	Q	V	G	N	F	P	P	L	F	A	E	W	N	D	H	F	R	D
Query Conservation
Alig confidence										.																										.	.	.	.	.	.	.	.	.
Template Conservation										.																										.	.	.	.	.	.	.	.	.
Template Sequence		A	Y	I	N	D	L	Q	A	.	I	G	V	K	G	F	R	F	D	A	S	K	H	V	A	A	S	D	I	Q	S	L	M	A	K	.	.	.	.	.	.	.	.	.	V	N	G	S	P	V	V	F	Q	E	V	I	D	Q	G	G	E	A	V	G	A	S	E	Y	L	S	T	G	L	V	T	E	F	K	Y	S	T
Template Known Secondary structure										.		T								T	G	G	G	S											T	.	.	.	.	.	.	.	.	.	S		S											S	S			S	S		G	G	G	G	G	G	G	S
Template Predicted Secondary structure										.																										.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190										.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	R	R	F	W	L	H	Y	D	L	P	L	G	A	F	A	G	R	F	A	A	S	S	D	V	F	K	R	N	G	R	L	P	S	A	A	I	N	L	V	T	A	H	D	G	F	T	L	R	D	C	V	C	F	N	H	K	H	N	E	A	N	G	E	E	N	R	D	G	T	N	N	N	Y	S	N	N	H	G
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	G	N	T	F	R	N	G	S	L	A	W	L	S	N	F	G	E	.	.	.	.	.	.	.	.	G	W	G	F	M	P	S	S	S	A	V	V	F	V	D	N	H	D	N	Q	R	G	H	G	G	A	G	N	V	I	T	F	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S		G	G	G	G	G	G	T	T	G	.	.	.	.	.	.	.	.	G	G	T				G	G	G					S			T	T	G	G	G	T	S	S			T	T	S			G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.									.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.		.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.					.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure																															.																	.	.	.	.
Query SS confidence																															.																	.	.	.	.
Query Sequence		K	E	G	L	G	G	S	L	D	L	V	E	R	R	R	D	S	I	H	A	L	L	T	T	L	L	L	S	Q	.	G	T	P	M	L	L	A	G	D	E	H	G	H	S	Q	H	.	.	.	.	G	N	N	N	A	Y	C	Q	D	N	Q	L	T	W	L	D	W	S	Q	A	S	S	G	L	T	A	F	T	A	A
Query Conservation																															.																	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																	.	.	.	.																								.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	L	Y	D	L	A	N	V	F	M	L	A	Y	P	Y	G	Y	P	K	V	M	S	S	Y	D	F	H	G	D	T	D	A	G	G	P	N	V	P	V	H	N	N	G	N	L	E	C	F	A	S	N	W	K	C	E	H	R	W	.	.	S	Y	I	A	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	T													S		S	S								B			T	T		T	T					S	S		S			T	T				B	S	S	S	S	B			G	G	G	S	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.
Template SS confidence
																281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.			340	.	.	.	.
		554	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	H	L	R	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	D	F	R	N	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions