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Job DescriptionP15067
Confidence100.00%DateThu Jan 5 11:34:29 GMT 2012
Rank27Aligned Residues553
% Identity18%Templatec3zt5D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:putative glucanohydrolase pep1a; PDBTitle: glge isoform 1 from streptomyces coelicolor with maltose2 bound
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GKPAPLGAHYDGQ. . GVNFTLFSA. . HAERVELCVFDA. NGQEHRYDLPGHSGD. . IWHGYLPDARPGLRYGYRVHGPWQ
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Template Sequence  RGRRPAKAVT. GESFEVSATVFREGHDAVGANVVLRDPRGRPGPWTPMRELAPGTDRWGATVTAGETG. TWSYTVEAWGD
Template Known Secondary structure  GGTB
T.T


SSS


TT

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B
SSTTS


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   32.......40. ........50.........60.........70.........80.........90........ .100.........
 
   80.........90.. .......100.........110.........120.........130.........140..
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Query Sequence  PAEGHRFNPAKLL. . . IDPCARQIDGEFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVDHYDWEDDA. . . . . . . . . . . . . .
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Template Sequence  PVTTWRHHARIKIPAGLDTDLVLEEG. . . . ARLYERAAADVPGREDRRELLAAVDALRDESRPAASRLAAALTPQVDAVL
Template Known Secondary structure  TSS....



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   110.........120.........130..... ....140.........150.........160.........170.........180.....
 
   143......150.........160...... ...170.........180.........190.........200.........
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Query Sequence  . . . PPRTPWGSTIIYEAHVKGLTYLHP. . . . . . . . . . EIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPR
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Template Sequence  ARHPLRDLVTSSDPLPLLVERERALYGAWYEFFPRSEGTPHTPHGTFRTA. . ARRLPAIAAMGFDVVYLPPIHPIGTTHR
Template Known Secondary structure  S









GGGS

SS

S

..GGGTT




S
B

TT
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   186...190.........200.........210.........220.........230..... ....240.........250.........260...
 
   210... ......220.........230.........240.........250.........260.........270.........
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Query Sequence  LQRM. . . . . . . . . . GLSNYWGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSL
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Template Sequence  KGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGT. . . . . LDDFDHFVTEAGKLGLEIALDFALQCSP. DHPWVHK. . .
Template Known Secondary structure 
BGGGBSS

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TTSB
BTTB
TTS

GGG

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   264.....270.........280.........290......... 300.........310.........320....... ..330....
 
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Query Sequence  RGIDNRSYYWIREDGDYHNWTGC. . . . . . . . GNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGRTPEFRQDA
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Template Sequence  . . . . HPEWFHHRPDGTIAHAENPPKKYQDIYPIAFDADPDGLATETVRILRHWMDH. GVRIFRVDNPHTKPVAFWERVIA
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GGGS


TTS



TTTT



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TT.T

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   335....340.........350.........360.........370.........380...... ...390.........400.........
 
   352.......360.........370.........380.........390.........400.........410.........420.........430.
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Query Sequence  PLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRL
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Template Sequence  DINGT. . . . . . DPDVIFLAEAFT. RPAMMATLAQIGFQQSYTYFTWRNTKQ. . . . . . . . . . . . . . ELTEYLTELSGEAAS
Template Known Secondary structure  ......
TT



S.
T
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SGGG

S..............TGGGG
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   410.... .....420...... ...430.........440.........450... ......460........
 
   432.......440.........450.........460.........470.........480.........490.........500.........510.
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Query Sequence  PSAAINLVTAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQGTPM
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Template Sequence  YMRPNFFANTPD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ILHAYLQHGGRPAFEVRAVLAATLSPTWG
Template Known Secondary structure  T

S
BTT.......................................B



S
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   469470.........480 .........490.........500.........
 
   512.......520....... ..530.........540...... ...550.........560.........570.........580....
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Query Sequence  LLAGDEHGHSQHGNNN. . . . AYCQDNQLTWLDWSQASSG. . . LTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYA
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Template Sequence  IYSGYELCENTPLREGSEEYLDSEKYQLKPRDWTRAAREGTTIAPLVTRLNTIRRENPALRQLR. . . . . . . DLHFHPTDK
Template Known Secondary structure  TTTTTT


BSSTT

SBTT
TTSS




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GGGG
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BS
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   510.........520.........530.........540.........550.........560.........570... ......580..
 
   585....590.........600.........610.... .....620... ......630.........640 .........650.
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Query Sequence  QPLSTDEWQNGPKQLQILLSDRFLIAINAT. . . LEVTEIVLP. . . . . . . . AGEWHAIPPFAGEDNPV. ITAVWQGPAHG.
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Template Sequence  EEVIA. . . . . . . . YSKRQGSNTVLVVVNLDPRHTQEATVSLDMPQLGLDWHESVPVRDELTGETYHWGRANYVRLEPGRT
Template Known Secondary structure  TT........TT

SSS


TGGGT

TT
TTTTS
TTT
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   583.... ..590.........600.........610.........620.........630.........640.........650....
 
   652....
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Query Sequence  . LCVFQ
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Template Conservation     
  
Template Sequence  PAHVCT
Template Known Secondary structure  S
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   655....660
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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