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Job DescriptionP15067
Confidence98.90%DateThu Jan 5 11:34:29 GMT 2012
Rank114Aligned Residues345
% Identity15%Templatec3lppA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:sucrase-isomaltase; PDBTitle: crystal complex of n-terminal sucrase-isomaltase with kotalanol
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   181........190... ......200.........210.........220.........230.........240.........250........
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Query Sequence  HPVMINYLKQLGI. . TALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEV
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Template Sequence  VKEVVRRNREAGIPFDTQVTDIDY. . . . . . . . . . . . . . . . . . MEDKKDFTYDQVAF. . . . . . . NGLPQFVQDLHDHGQKY
Template Known Secondary structure  TT




GGG..................SSTT
TT


TTTT.......TTTT
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   335....340.........350........ .360.........370.. .......380.........
 
   259260.........270.... .....280.........290..... ... .300.........310.........320.........330..
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Query Sequence  ILDIVLNHSAELDLDG. . PLFSLRGIDNRSYYWIREDGD. . YHN. . WTGCGNTLNLSHPAVVDYASACLRYWVETCHVDG
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Template Sequence  VI. ILDPAISIGRRANGTTYATYERGNTQHVWINESDGSTPIIGEVWPGLTVYPDFTNPNCIDWWANECSIFHQEVQYDG
Template Known Secondary structure  .
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TTS


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B
TTSSSB

TT
B
TTSS

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   390. ........400.........410.........420.........430.........440.........450.........460........
 
   333......340 .........350.........360....
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Query Sequence  FRFDLAAV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MGRTPEFRQDAPLFTAIQNCPVLS
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Template Sequence  LWIDMNEVSSFIQGSTKGCNVNKLNYPPFTPDILDKLMYSKTICMDAVQNWGKQYDVHSLYGYSMAIATEQAVQKVFPNK
Template Known Secondary structure 
STTT

SSSB
TT



STTTS
SS

S
GGG
TTTTSB
TT
TTGGGSTTB
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   469470.........480.........490.........500.........510.........520.........530.........540........
 
   365....370.........380.........390.........400.........410.........420.........430.........440....
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Query Sequence  QVKLIAEPWDIAPGGYQVGNFPPLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDG
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Template Sequence  RSFILTRSTFAGSGRHAAH. . . . . . . . . . . . . . . . . . . . WLGDNTASWE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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TTGGGT
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   549550.........560....... ..570.......
 
   445....450.........460.........470.........480.........490.........500.........510.........
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Query Sequence  FTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQGTPMLLAGDEHG. . . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QMEWSITGMLEFSLFGIPLV. . GADICGFVAE
Template Known Secondary structure  ................................................TT

S..
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SBS
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   578.580.........590....... ..600.......
 
   520.........530.........540.........550.........560.........570.........580.....
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Query Sequence  . . . . . . . . . . . . . . HSQHGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQ
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Template Sequence  TTEELCRRWMQLGAFYPFSRNHNSDGYEHQDPAFF. GQNSLLVKSSRQYLTIRYTLLPFLYTLFYKAHVFGETVARP. . .
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SGGGG.
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   608.610.........620.........630.........640.. .......650.........660.........670.........680...
 
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Query Sequence  PLSTDEWQNGPKQ. . . LQILLSDRFLIA. . INATLEVTEIVLPAGEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR
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Template Sequence  . VLHEFYEDTNSWIEDTEFLWGPALLITPVLKQGADTVSAYIPDAIWYDYESGAKRPWRKQRVDMYLPADKIGLHLR
Template Known Secondary structure  .TTTSGGGGG

SSTTT


STT
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B
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   684.....690.........700.........710.........720.........730.........740.........750.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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