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Job DescriptionP15067
Confidence100.00%DateThu Jan 5 11:34:29 GMT 2012
Rank25Aligned Residues451
% Identity21%Templatec3czkA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:sucrose hydrolase; PDBTitle: crystal structure analysis of sucrose hydrolase(suh) e322q-2 sucrose complex
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   149150.........160.........170.........180.........190.........200.........210.........220........
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Query Sequence  GSTIIYEAHVKGLTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFA
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Template Sequence  PHMLGYSAYADRFA. . . . . . . . . . . GTLQGV. . AERVPYLQELGVRYLHLLPFLRARAGDN. . . . . . . . DGGFAVSDYGQ
Template Known Secondary structure  TT


...........SS..TT
S



SS

........TTTTS
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   8990.........100.. ...... .110.........120.........130...... ...140.......
 
   229230.........240.........250.........260.........270.........280.........290.....
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Query Sequence  LHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGD. . . . . . . . . . . . .
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Template Sequence  VEPSLGS. . . . . NDDLVALTSRLREAGISLCADFVLNHTADDHAWAQAARAGDARYLDYYHHFADRTVPDRYEATLGQVF
Template Known Secondary structure 
TTT

.....TT



STTSTT
TTB
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SB
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   148.150.... .....160.........170.........180.........190.........200.........210.........220..
 
   296...300.........310.........320.........330.........340......... 350..
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Query Sequence  . . . . . . . . . . . . . . . . . . YHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGRTPEFRQ. . . . . DAP
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Template Sequence  PHTAPGNFTWVDDTAQWMWTTFYPYQWDLNWSNPAVFGDMALAMLRLA. NLGVEAFRLDSTAYLWKRIGTDCMNQSEAHT
Template Known Secondary structure  TTTB

STTTT
SSSTTB
TTS.TT

TTTTSS


TTS
SSS
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   223......230.........240.........250.........260.........270 .........280.........290.........300.
 
   353...... 360.........370.........380..... ....390.........400.........410.........420.....
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Query Sequence  LFTAIQN. . CPVLSQVKLIAEPWDIAPGGYQVGNF. . . . . PPLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAASSDVF
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Template Sequence  LLVALRAVTDIVAPAVVMKAQAIVPMTQLPPYFGSGVDEGHECHLAYHSTLMAAGWSALALQRG. . . . . . . DILHNVIAH
Template Known Secondary structure 
TT





GGGSGGGG

GGGTTSS
S
T
T.......T
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   302.......310.........320.........330.........340.........350.........360..... ....370....
 
   426...430.........440.........450......... 460.........470.........480.
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Query Sequence  KRNGRLPSAAINLVTAHDGFTLRDCVCFNHKHNE. . . . . . . . . . . . . ANGEENRDGTNNNYSNNHGKEG. . . . . . . . . . .
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Template Sequence  SPPLPRHCAWLSYVRCHDDIGWNVLQHEACGNAAQPPFSLRDVARFYANAVPGSYARGESFQGVHGTNGMAAALAGIQAA
Template Known Secondary structure  S



TT
S

SS
GGGGT

SSS



T
STT










TT
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   375....380.........390.........400.........410.........420.........430.........440.........450....
 
   482.......490.........500.........510.........520 .........530.........540 .....
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Query Sequence  . LGGSLDLVERRRDSIHALLTTLLLSQGTPMLLAGDEHGH. . . . . . SQHGNNNAYCQDNQLTWLDW. . . . . . . . . SQASS
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Template Sequence  QEAGDAAALAVAVDRLVLLYAIALAMPGVPLIYMGDELAMVNDPGYRDDPHRQHEGRWLHRPAMDWQLAAQRHDAKSLSG
Template Known Secondary structure  TT
SSTTGGGT



GGGGG
TTTTT
GGGGG




TTS
TTS
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   459460.........470.........480.........490.........500.........510.........520.........530........
 
   546...550.........560.........570.........580.........590.........600.........610.........620.....
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Query Sequence  GLTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIVLPAG
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Template Sequence  TVYRRLRGLIRQRAALGALAADQALA. . . . . . . . . . . . . . . . . . SIALNDPRVFALTRGDSFIALHNFSDQLLDVELAAI
Template Known Secondary structure  T
GGGSTTS
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S
TTTTT
SSS

GGGT
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   539540.........550.........560.... .....570.........580.........590.........600
 
   626...630.........640.........650.......
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Query Sequence  EWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR
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Template Sequence  GVDGWTLLRG. . . . . . DGSIVLPPYGVRWLQR
Template Known Secondary structure  T






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TT

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   601........610 .........620......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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