Job Description P15067 Confidence 99.72% Date Thu Jan 5 11:34:29 GMT 2012 Rank 110 Aligned Residues 311 % Identity 14% Template c3aicC_ PDB info PDB header:transferase Chain: C: PDB Molecule:glucosyltransferase-si; PDBTitle: crystal structure of glucansucrase from streptococcus mutans Resolution 3.11 Å

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		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.										.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.
Query Sequence		S	L	R	G	I	D	N	R	S	Y	Y	W	I	R	E	D	G	D	Y	H	N	W	T	G	C	G	N	T	L	N	L	S	H	P	A	V	V	D	Y	A	S	A	C	L	R	Y	W	V	.	.	.	.	.	.	.	.	.	E	T	C	H	V	D	G	F	R	F	D	L	A	A	V	M	G	R	T	P	E	F	R
Query Conservation																																																		.	.	.	.	.	.	.	.	.
Alig confidence																						.	.																											.	.	.	.	.	.	.	.	.
Template Conservation																						.	.
Template Sequence		N	Q	T	G	K	K	D	P	R	Y	T	A	D	R	T	I	G	G	Y	E	.	.	F	L	L	A	N	D	V	D	N	S	N	P	V	V	Q	A	E	Q	L	N	W	L	H	F	L	M	N	F	G	N	I	Y	A	N	D	P	D	A	N	F	D	S	I	R	V	D	A	V	D	N	V	D	A	D	L	L	Q	I
Template Known Secondary structure		T	T	T	S	S			T	T			S			S		S			S	.	.			S	S					T	T	S															T	T							S		G	G	G								T	T	G	G	G	S		T
Template Predicted Secondary structure																						.	.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.			.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
		349	350	.	.	.	.	.	.	.	.				.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		Q	D	A	P	L	F	T	A	I	Q	.	.	.	N	C	P	V	L	S	Q	V	K	L	I	A	E	P	W	D	I	A	P	G	G	Y	Q	V	G	N	F	P	P	L	F	A	E	W	N	D	H	F	R	D	A	A	R	R	F	W	L	H	Y	D	L	P	L	G	A	F	A	G	R	F	A	A	S	S	D	V	F
Query Conservation												.	.	.
Alig confidence												.	.	.																																.
Template Conservation																																														.
Template Sequence		A	G	D	Y	L	K	A	A	K	G	I	H	K	N	D	K	A	A	N	D	H	L	S	I	L	E	A	W	S	Y	N	D	T	P	Y	L	H	D	D	G	D	N	M	I	.	N	M	D	N	R	L	R	L	S	L	L	Y	S	L	A	K	P	L	N	Q	R	S	G	M	N	P	L	I	T	N	S	L	V	N	R
Template Known Secondary structure												T	T	T							T	T								S	T	T								T	T		S	S	B	.		B												T	T	S		G	G	G				S	T					S	S	S	S
Template Predicted Secondary structure																																														.
Template SS confidence
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.		.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
		426	.	.			.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.																											.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure					.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	N	.	.	G	R	L	P	S	A	A	I	N	L	V	T	A	H	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	L	R	D	C	V	C	F	N	H	K	H	N	E	A	N	G	E	E	N	R	D	G	T	N	N	N	Y	S	N	N	H
Query Conservation					.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		T	D	D	N	A	E	T	A	A	V	P	S	Y	S	F	I	R	A	H	D	S	E	V	Q	D	L	I	R	D	I	I	K	A	E	I	N	P	N	V	V	G	Y	S	F	T	M	E	E	I	K	K	A	F	E	I	Y	N	K	D	L	L	A	T	E	K	K	Y	T	H	Y	N	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S					S	B		S	S						S			S	S	T	T	T												T		T	T			T	T																					S	S		S	S	S		S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.		.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		G	K	E	G	L	G	G	S	L	D	L	V	E	R	R	R	D	S	I	H	A	L	L	T	T	L	L	L	.	S	Q	G	T	P	M	L	L	A	G	D	E	H	G	H	S	Q	H	G	N	N	N	A	Y	C	Q	D	N	Q	L	T	W	L	D	W	S	Q	A	S	S	G	L	T	A	F	T	A	A	L	I	H
Query Conservation																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	L	S	Y	A	L	L	L	T	N	K	S	S	V	P	R	V	Y	Y	G	D	M	F	T	D	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	M	A	H	K	T	I	N	Y	E	A	I	E	T	L	L	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T		S	S	S										B		S	S	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T		S	B		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.																	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.						.	.	620	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.										.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.										.	.	.	.	.
Query Sequence		L	R	K	R	I	P	A	L	V	E	N	R	W	W	E	E	G	D	G	N	V	R	W	L	N	R	Y	A	Q	P	L	S	T	D	E	W	Q	N	G	P	K	Q	L	Q	I	L	L	S	D	R	F	L	I	A	I	N	A	T	L	E	V	.	.	.	.	.	T	E	I	V	L	P	A	G	E	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.										.	.	.	.	.
Alig confidence																																										.	.	.																			.	.	.	.	.										.	.	.	.	.
Template Conservation																																										.	.	.
Template Sequence		A	R	I	K	Y	V	S	G	G	Q	A	M	R	N	Q	Q	V	G	N	S	E	I	I	T	S	V	R	Y	G	K	G	A	L	K	A	T	D	T	G	D	.	.	.	R	I	T	R	T	S	G	V	V	V	I	E	G	N	N	P	S	L	R	L	K	A	S	D	R	V	V	V	N	M	G	A	A	H	K	N	Q
Template Known Secondary structure									S										T	T											T	T			S	T	T					.	.	.					T											T	T		B			T	T									G	G	G	T	T
Template Predicted Secondary structure																																										.	.	.
Template SS confidence
		686	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.				.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.
			627	.	.	630	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	W	H	A	I	P	P	F	A	G	E	D
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	Y	R	P	L	L	L	T	T	D	N	G
Template Known Secondary structure											S	S	S
Template Predicted Secondary structure
Template SS confidence
		763	.	.	.	.	.	.	770	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions