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Job DescriptionP15067
Confidence95.43%DateThu Jan 5 11:34:29 GMT 2012
Rank225Aligned Residues323
% Identity15%Templatec3a23A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative secreted alpha-galactosidase; PDBTitle: crystal structure of beta-l-arabinopyranosidase complexed with d-2 galactose
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   188.190.........200.........210.........220.........230. ........240.........250.........260......
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Query Sequence  LKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHP. AYACSPETALDEFRDAIKALHKAGIEVILDIVLNH
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Template Sequence  LPAAGYTYINIDEGWWQGTRDS. . . . . . . . . . . . . . AGNITVDTAEWPGG. . . . . . . MSAITAYIHSKGLKAGIYTDAGK
Template Known Secondary structure  T



TTS

S
B
T..............TS
B


TTTSTT
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   87..90.........100........ .110.........120.. .......130.........140.....
 
   267..270.........280.........290.........300.........310.........320.........330.........340 .
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Query Sequence  SAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAV. . . . . M
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Template Sequence  DGCGYYYPTGR. . . . . . . . . . . . . . . . . . . . . . . . . . . . PAAPGSGSEGHYDQDMLQFSTW. GFDFVKVDWCGGDAEGLD
Template Known Secondary structure  S
S
SSS............................


TT
S
TT
.T
S
T

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   146...150...... ...160.........170........ .180.........190......
 
   342.......350.........360.........370.........380.........390.........400.........410.........420.
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Query Sequence  GRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAAS
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Template Sequence  AATTYKSISDAVGRAAAT. . TGRPLTLSICNWGYQNPWNWAAGQAPLWRTSTD. . . . . . . . . . IIYYGNQPSMTSLLSNF
Template Known Secondary structure  ..S




TTTT
GGGT
TTT
S
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TT



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   197..200.........210.... .....220.........230.........240....... ..250.........260....
 
   422.......430.........440.........450.........460.........470.........480.........490.........500.
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Query Sequence  SDVFKRNGRLPSAAINLVTAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLT
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Template Sequence  DQTLHPTAQHTGYY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NDPDMLMVGMDGFTAAQNRTHMNLW
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TTT
BTTB.........................................

S

TT
TT

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   265....270........ .280.........290.........300...
 
   502.......510.........520.........530.........540.........550. ........560.........570.........
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Query Sequence  TLLLSQGTPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSGLTAFT. . AALIHLRKRIPALVENRWWEEGDGNVRW
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Template Sequence  AIS. . . GAPLLAGN. . . . . . . . . . . . . . . . . . . . . . . DLTTMTSETAGILKNPEVIAVDQDSRGLQGVKVAEDTTGLQAY
Template Known Secondary structure  ...T


S.......................
GGG

T
T
TT



TT
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   304.. ...310.... .....320.........330.........340.........350.......
 
   580.........590.........600.........610.........620. ........630.........640... ......650
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Query Sequence  LNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIV. . . . . . . LPAGEWHAIPPFAGEDNPVITA. . VWQGPAH
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Template Sequence  G. . . . . . . . . . . . . . . . . KVLSGTGNRAVVLLNRTSAAHDITVRWSDLGLTNASATVRDLWARQNVGTSATGYTASVPAG
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SSSS

SSS
TTTTTB
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TTTTSS
TT
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   358 .360.........370.........380.........390.........400.........410.........420
 
   651.....
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Query Sequence  GLCVFQ
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Template Sequence  GSVMLT
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   421.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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