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Job DescriptionP15067
Confidence100.00%DateThu Jan 5 11:34:29 GMT 2012
Rank42Aligned Residues431
% Identity18%Templatec2zidA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dextran glucosidase; PDBTitle: crystal structure of dextran glucosidase e236q complex with2 isomaltotriose
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   148.150.........160.........170.........180.........190.........200.........210.........220.......
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Query Sequence  WGSTIIYEAHVKGLTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMF
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Template Conservation      


 
    
 
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Template Sequence  WHKATVYQIYPKSFMDTNGDGI. . . . GDLKGI. . TSKLDYLQKLGVMAIWLSPVYDSPMDD. . . . . . . . . . NGYDIANYE
Template Known Secondary structure  GGG


GGGT

SSSSSS....

..TTT
S





TT..........TTSS
S
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   6...10.........20....... ..30... ......40.........50.........60 .........
 
   228.230.........240.........250.........260.........270...... ...280.........290.........300....
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Query Sequence  ALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPL. . FSLRGIDNRSYYWIREDGDYHNWTGCGN.
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Template Sequence  AIADIFGN. . . . . MADMDNLLTQAKMRGIKIIMDLVVNHTSDEHAWFIEAREHPDSSERDYYIWCDQPNDLESIFGGSAW
Template Known Secondary structure 
GGG

.....TTT


SB

TTS
TTSGGGGGB
SS

S
B
TTSSBS
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   70....... ..80.........90.........100.........110.........120.........130.........140....
 
   305....310.........320.........330.........340.........350 .........
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Query Sequence  . . . . . . . . . . . . . . . . . . . TLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGRTPEFRQD. . . . . . APLFTAIQN
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Template Sequence  QYDDKSDQYYLHFFSKKQPDLNWENANLRQKIYDMMNFWI. DKGIGGFRMDVIDMIGKIPAQHIVSNGPKLHAYLKEMNA
Template Known Secondary structure  TTTT
SS
TTS
BB
TT
.TTT

TTGGGTT
BGGGTB
SS
TT
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   145....150.........160.........170.........180.... .....190.........200.........210.........220...
 
   360.........370.........380 .........390.........400...... ...410.........420.........430
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Query Sequence  . CPVLSQVKLIAEPWDIAPGGY. . . QVGNFPPLFAEWNDHFRDAARRFWLH. . . . . YDLPLGAFAGRFAASSDVFKRNGR
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Template Conservation              
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Template Sequence  ASFGQHDLLTVGQTWGATPEIAKQYSNPVNHELSMVFQFEHIGLQHKPEAPKWDYVKELNVPALKTIFNKWQTELELGQ.
Template Known Secondary structure  TGGGS


TT


GGG
S
S

TTGGGGB
TTS
TTSB

S

S
TTT.
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   224.....230.........240.........250.........260.........270.........280.........290.........300..
 
   431........440.........450.........460.........470.........480.........490.........500.........510
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Query Sequence  LPSAAINLVTAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQGTP
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Template Conservation  ..         

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Template Sequence  . . GWNSLFWNNHDLPRVLSIW. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GNTGKYREKSAKALAILLHLMRGTP
Template Known Secondary structure  ..



S

TTS

..................................S
SSTTTSSS
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   303......310.........320. ........330.........340......
 
   511........520.........530. ........540......
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Query Sequence  MLLAGDEHGHSQHGNNNAYCQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DNQLTWLDWSQASSG. . . . . . . . . . . . .
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Template Conservation   
  
 
 
                                              
  
 
       
           
Template Sequence  YIYQGEEIGMTNYPFKDLNELDDIESLNYAKEAFTNGKSMETIMDSIRMIGRDNARTPMQWDASQNAGFSTADKTWLPVN
Template Known Secondary structure  TTGGGT






SGGG


TTT


GGGG
S




SSGGGGS

SSS
SS


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   347..350.........360.........370.........380.........390.........400.........410.........420......
 
   547..550.........560.........570.........580.........590.........600.........
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Query Sequence  . . . . . . . . . . . . . . . . . LTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLI
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Template Conservation                          
  

   
 
  
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Template Sequence  PNYKDINVQAALKNSNSIFYTYQQLIQLRKENDWLVDADFELLPTA. . . . . . . . . . . . . . . . . DKVFAYLRKVREERYLI
Template Known Secondary structure  GGGGTS
STTS
T




.................TTTT
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   427..430.........440.........450.........460.........470.. .......480.........
 
   610.........620.........630.........640.........650......
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Query Sequence  AINATLEVTEIVLPAGEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQ
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Template Conservation 
 
         
       

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Template Sequence  VVNVSDQEEVLEIDVDKQETLISNT. . NESAALANHKLQPWDAFCIK
Template Known Secondary structure 
SSS






SS..
T
TT
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   490.........500.........510.... .....520.........530....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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