 |
Job Description | P15067 | Confidence | 89.22% | Date | Thu Jan 5 11:34:29 GMT 2012 |
Rank | 302 | Aligned Residues | 68 |
% Identity | 10% | Template | c2wnwB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:activated by transcription factor ssrb; |
PDBTitle: the crystal structure of srfj from salmonella typhimurium
|
Resolution | 2.00 Å |
|
 |
  |   |
568 | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | W | W | E | E | G | D | G | N | V | R | W | L | N | R | Y | A | Q | P | L | S | T | D | E | W | Q | N | G | P | K | Q | L | Q | I | L | L | S | D | R | F | L | I | A | I | N | A | T | L | E | V | T | E | I | V | L | P | A | G | E | W | H | A | I | P | P | F | A | G | E | D | N | P | V | I | T | A | V | W | Q | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |
|   |
|
|   |
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . |
|   |   |   |
|
|
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |
|
Template Sequence |   |
R | Y | V | R | P | G | A | R | V | M | L | S | S | S | Y | D | N | L | L | E | E | V | . |
. |
. |
. |
. |
. |
. |
. |
G | F | V | N | P | D | G | E | R | V | L | V | V | Y | N | R | D | V | Q | E | R | R | C | R | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | D | G | D | K | E | I | A | L | T | L |
Template Known Secondary structure |   |
T | T |
|
| T | T |
|  |  |  |  |  |  |  | S | S | T | T |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
375 | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 430 | . | . |
  |
  |   |
648 | . | 650 | . | . | . | |
|
. | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  | . | . |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
| . |
. |
|
|
|
|
Query Sequence |   |
P | A | H | G | L | C | . |
. |
V | F | Q | R |
Query Conservation |   |
|
|   |   |   |   | . | . |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |
|   |
|   |   |   |
Template Sequence |   |
P | P | S | G | A | S | T | L | L | W | R | Q |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
433 | . | . | . | . | . | . | 440 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|