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Job DescriptionP15067
Confidence100.00%DateThu Jan 5 11:34:29 GMT 2012
Rank7Aligned Residues569
% Identity26%Templatec2wanA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:pullulanase; PDBTitle: pullulanase from bacillus acidopullulyticus
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40 .........50.........60.........70.........80........
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Query Sequence  PLGAHYDGQGVNFTLFSAHAERVELCVFDA. . NGQEHRYDLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNP
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Template Sequence  DLGNVYSKDATSFRVWAPTASNVQLLLYNSEKGSITKQLEMQKSDNGTWKLQVSGNLENWYYLYQVT. . . . . . . . . VNGT
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SS
TT
SSSSSS

S

GGGS

TT
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SS
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   317..320.........330.........340.........350.........360.........370.........380... ....
 
   8990.........100.........110.........120.........130.........140........ .150.........160.......
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Query Sequence  AKLLIDPCARQIDGEFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPW. GSTIIYEAHVKGLTYLHPE
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Template Sequence  TQTAVDPYARAISVNATRGMIVDLKATDPA. . . . . . . . . . . . . . . . . . GWQGDHEQTPANPVDEVIYEAHVRDFSI. DAN
Template Known Secondary structure 

TT
SSBSGGGSS


GGGGS
T..................TGGG





SSGGG



.STT
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   388.390.........400.........410....... ..420.........430.........440..... ...
 
   168.170.........180 .........190.........200.........210.........220.........230........
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Query Sequence  IPVEIRGTYKALG. . . . . . . . . HPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPE
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Template Sequence  SGMKNKGKYLAFTEHGTKGPDHVKTGIDSLKELGITTVQLQPVEEFNSIDETQPD. . TYNWGYDPRNYNVPEGAYATTPE
Template Known Secondary structure  S

SSTTSGGGGG

S
B
GGG
B
T

S

SSS
TTSTT..S




S
GGGSS
SS
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   449450.........460.........470.........480.........490.........500... ......510.........520......
 
   239 240.........250.........260.........270.........280.........290.........300.........310......
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Query Sequence  T. . ALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDY
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Template Sequence  GTARITELKQLIQSLHQQRIGVNMDVVYNHTFDVMVSD. . . . FDKIVPQYYYRTDSNGNYTNGSGG. NEFATEHPMAQKF
Template Known Secondary structure  TTTT

TT

S
SSSS....STTTTB
B
TTS
B

TT

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TTS
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   527..530.........540.........550.........560.... .....570.........580........ .590.........600.
 
   317..320.........330.........340.........350.........360.........370.........380...... ...
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Query Sequence  ASACLRYWVETCHVDGFRFDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFP. . . . . . . PLF
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Template Sequence  VLDSVNYWVNEYHVDGFRFDLMALLGKDTMAKISNELHA. . . . . . INPGIVLYGEPWTGGTSGLSSDQLVTKGQQKGLGI
Template Known Secondary structure 


TTGGGG
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TT

SS
SS

SS
TTTS

TTTTTTTT
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   603......610.........620.........630.........640. ........650.........660.........670......
 
   390.........400.. .......410.........420.........430.........440.........450.........460
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Query Sequence  AEWNDHFRDAARR. . . . . . . . . FWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDCVCFNHKHNEA
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Template Sequence  GVFNDNIRNGLDGNVFDKTAQGFATGDPNQVDVIKNGVIGSIQDFTSA. . . PSETINYVTSHDNMTLWDKILASNPSDTE
Template Known Secondary structure 


TT
TT


TTTT
SS
BTTTTTT
SS...GGG
S

SSS


TTS
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   677..680.........690.........700.........710.........720.... .....730.........740.........750...
 
   461........470.........480.........490.........500.........510.........520.........530.........540
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Query Sequence  NGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQGTPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDW
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ADRIKMDELAHAVVFTSQGVPFMQGGEEMLRTKGGNDNSYNAGDSVNQFDW
Template Known Secondary structure  .............................SBSTTGGGT


TT
S

TT

S

T
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   754.....760.........770.........780.........790.........800....
 
   541 ........550.........560.........570.........580.........590.........600.........610........
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Query Sequence  S. . QASSGLTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVT
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Template Sequence  SRKAQFKDVFDYFSSMIHLRNQHPAFRMTT. ADQIKQNLTFLESPTNTVAFELKNYA. . . . NHDTWKNIIVMYNPNKTSQ
Template Known Secondary structure  T
GGGG

S.



TT

SSG....GG
SSS

SSS
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   805....810.........820.........830.... .....840.........850.........860 .........870.........
 
   619620.........630.... .....640.........650.......
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Query Sequence  EIVLPAGEWHAIPPFA. . . GEDNPVITAVWQGPAHGLCVFQR
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Template Sequence  TLNLPSGDWTIVGLGDQIGEKSLGHVMGNVQVPAISTLILKQ
Template Known Secondary structure 

SS
TTSSS
S

S
SS
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   880.........890.........900.........910.........920.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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