Return to main results Retrieve Phyre Job Id

Job DescriptionP15067
Confidence81.59%DateThu Jan 5 11:34:29 GMT 2012
Rank338Aligned Residues56
% Identity23%Templatec2vycA_
PDB info PDB header:lyaseChain: A: PDB Molecule:biodegradative arginine decarboxylase; PDBTitle: crystal structure of acid induced arginine decarboxylase2 from e. coli
Resolution2.4 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   188.190.........200.........210.........220. ........230... ....
Predicted Secondary structure 


























.............................











.



Query SS confidence 

































. . . . . . . . . . . . . . . . . . . . . . . . . . . . .











.



Query Sequence  LKQLGITALELLPVAQFASEPRLQRMGLSNYWGY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . NPVAMFALHPAY. ACSP
Query Conservation 

 


  
 
 

                 


.............................    
 


  
.

  
Alig confidence 
















.............



.............................











.

..
Template Conservation 
 



 



 
  
 .............   

 
    
    
   
   
          









 

..
Template Sequence  LMLTGAKPVYMVPSRNR. . . . . . . . . . . . . YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGV. .
Template Known Secondary structure 




B
T.............TS
B



GGGGS
TTTGGGTT


S
SS
TTS..
Template Predicted Secondary structure 







.............





















..
Template SS confidence 















































































   262.......270........ .280.........290.........300.........310.........320......
 
   238.240.........250.........260.
Predicted Secondary structure 





Query SS confidence 























Query Sequence  ETALDEFRDAIKALHKAGIEVILD
Query Conservation       


 

  

  

 



Alig confidence  ...




















Template Conservation  ...  

  
    
     



Template Sequence  . . . CYNAKEAQDLLEKTSDRLHFD
Template Known Secondary structure  ...
TTT
S
Template Predicted Secondary structure  ...


Template SS confidence 























   327..330.........340.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions