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Job DescriptionP15067
Confidence100.00%DateThu Jan 5 11:34:29 GMT 2012
Rank74Aligned Residues430
% Identity12%Templatec2gdvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sucrose phosphorylase; PDBTitle: sucrose phosphorylase from bifidobacterium adolescentis2 reacted with sucrose
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   148.150.........160.........170.........180.........190.........200.........210.........220.......
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Query Sequence  WGSTIIYEAHVKGLTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMF
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Template Sequence  MKNKVQLITYADRLGD. . . . . . . . . . GTIKSM. . TDILRTRFDGVYDGVHILPFFTPFDGAD. . . . . . . . . AGFDPIDHT
Template Known Secondary structure 

SS

SSSBSS..........SS..STTT
S



SSSSS.........TTSS
S
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   1........10...... ...20.. .......30.........40.........50 .........
 
   228.230.........240.........250.........260.........270.........280.........290
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Query Sequence  ALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWI. . . . . . . . . . . . . . . . .
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Template Sequence  KVDERLGS. . . . . WDDVAELS. . . . . KTHNIMVDAIVNHMSWESKQFQDVLAKGEESEYYPMFLTMSSVFPNGATEEDLA
Template Known Secondary structure 
TTT

.....T.....TTS
STTSGGGSTTGGGB
B
TT


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   60....... ..70..... ....80.........90.........100.........110.........120.........
 
   291........300.........310.........320.........330.........340.........350.
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Query Sequence  . . . . . . . . . . . . . . . . . . REDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGRTPEFRQDA.
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Template Sequence  GIYRPRPGLPFTHYKFAGKTRLVWVSFTPQQVDIDTDSDKGWEYLMSIFDQMA. ASHVSYIRLDAVGYGAKEAGTSCFMT
Template Known Secondary structure  TS

SSSS
STT
SSSTTB
TTS.TT

TGGGS


TTS
SSS
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   130.........140.........150.........160.........170.........180.. .......190.........200........
 
   352.......360.........370.........380.........390.........400.........410.........420.......
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Query Sequence  . . . . PLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKR
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Template Sequence  PKTFKLISRLREEGVKRGLEILIEVHSYYKKQVEIA. . SKVDRVYDFALPPLLLHALSTGHVEPVAHWTDI. . . . . . . . .
Template Known Secondary structure  TTT



S
G..GGSS
S


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   209210.........220.........230.........240.... .....250.........260.........270.......
 
   428.430.........440.........450 .........460.........470.........480. ........
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Query Sequence  NGRLPSAAINLVTAHDGFTLRDC. . . . . . . . . . . . . . . . . VCFNHKHNEANGEENRDGTNNNYSNNHGKEG. LGGSLDLV
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Template Sequence  . . . RPNNAVTVLDTHDGIGVIDIGSDQLDRSLKGLVPDEDVDNLVNTIHANTHGESQAATGAAASNLDLYQVNSTYYSAL
Template Known Secondary structure  ...S
SS
S

SS
B
STTTS

SS
TTS

SS
TTTSGGGSB
S
SSSB
S
T
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   278.280.........290.........300.........310.........320.........330.........340.........350....
 
   490.........500.........510.........520...... ...530.........540.. .......550.........560..
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Query Sequence  ERRRDSIHALLTTLLLSQGTPMLLAGDEHGHSQHGNN. . . NAYCQDNQLTWLDWSQ. . . . ASSGLTAFTAALIHLRKRIP
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Template Sequence  GCNDQHYIAARAVQFFLPGVPQVYYVGALAGKNDMELLRKTNNGRDINRHYYSTAEIDENLKRPVVKALNALAKFRNELD
Template Known Secondary structure  TT
SSSTT




BGGGGG


B
TTS
G
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   355....360.........370.........380.........390.........400.........410.........420.........430....
 
   563......570.........580.........590.........600.........610. ........620.........630....
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Query Sequence  ALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAI. . . . . . . . NATLEVTEIVLPAGEWHAIPPFA
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Template Sequence  AFD. . . . . . . . . . . . . . . . . . GTFSYTTDDDTSISFTWRGETSQATLTFEPKRGLGVDNTTPVAMLEWEDSAGDHRSDDL
Template Known Secondary structure  GGG..................STTT
SS

GGGG
STT

S

TTS
T
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   435.. ..440.........450.........460.........470.........480.........490......
 
   635....640.
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Query Sequence  GEDNPVI
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Template Conservation         
Template Sequence  IANPPVV
Template Known Secondary structure  TTS



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   497..500...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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