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Job DescriptionP15067
Confidence100.00%DateThu Jan 5 11:34:29 GMT 2012
Rank79Aligned Residues398
% Identity19%Templatec1wpcA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glucan 1,4-alpha-maltohexaosidase; PDBTitle: crystal structure of maltohexaose-producing amylase complexed with2 pseudo-maltononaose
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   155....160.........170.........180.........190.........200.........210.........220.......
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Query Sequence  EAHVKGLTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMF. . . . . . .
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Template Sequence  GTMMQYFEWYLPNDG. . . . NHWNRL. . NSDASNLKSKGITAVWIPPAWKGASQND. . . . . . . . . VGYGAYDLYDLGEFNQ
Template Known Secondary structure 




TT

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SSSTT
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STT
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B
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   7..10.........20. ...... ..30.........40.........50..... ....60.........70.
 
   228.230.........240.........250.........260.........270.........280.........290.........300..
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Query Sequence  . . ALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWTGC. . .
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Template Sequence  KGTVRTKYGT. . . . . RSQLQAAVTSLKNNGIQVYGDVVMNHKGGADATEMVRAVEVNPNNRNQEVTGEYTIEAWTRFDFP
Template Known Secondary structure  TTBSS
SS

.....TT


S
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   72.......80. ........90.........100.........110.........120.........130.........140......
 
   303......310.........320......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GNTLNLSHPAVVDYASACLRYWVE
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Template Sequence  GRGNTHSSFKWRWYHFDGVDWDQSRRLNNRIYKFRGHGKAWDWEVDTENGNYDYLMYADIDMDHPEVVNELRNWGVWYTN
Template Known Secondary structure  TTTTSS



B
GGGS

TTT

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STT



SS


TTS




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TT
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   147..150.........160.........170.........180.........190.........200.........210.........220......
 
   327..330.........340.........350.........360.........370.........380... ......390.........400....
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Query Sequence  TCHVDGFRFDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVG. . NFPPLFAEWNDHFRDAARRFW
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Template Sequence  TLGLDGFRIDAVKHIKYSFTRDWINHVRSAT. . . . . GKNMFAVAEFWKNDLGAIENYLQKTNWNHSVFDVPLHYNLYNAS
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STTGGGS
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   227..230.........240.........250....... ..260.........270.........280.........290.........300.
 
   405....410.........420.........430.........440.........450.........460.........470.........480....
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Query Sequence  LHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGG
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Template Sequence  KSGGN. . . . . . . YDMRNIFNGTVVQRHPSHAVTFVDNHDSQPEEALESFVEE. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTTT
.......S
GGGTTTT

GGG
S

TTTSTTSTT




T............................
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   302.... ...310.........320.........330.........340......
 
   485....490.........500.........510.........520.........530.........540.........550.........560....
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Query Sequence  SLDLVERRRDSIHALLTTLLLSQGTPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPAL
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Template Sequence  . . . . . . . . WFKPLAYALTLTREQGYPSVFYGDYYGIPTHGVPA. . . . . . . . . . . . . . . . . . . MRSKIDPILEARQKYAYG
Template Known Secondary structure  ........TTSSSSS
BGGGTB

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T

S
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   347..350.........360.........370.........380. ........390.........
 
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Query Sequence  VENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLE. VTEIVLP. . . . AGEWHAIPPFAGEDN.
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Template Sequence  . . . . . . . . . . . KQNDYLDHHNIIGWTREGNTAHP. . . . . NSGLATIMSDGAGGSKWMFVGRNKAGQVWSDITGNRTGTVT
Template Known Secondary structure  ...........


SSS


TTST.....T

SSS


GGGTT
TTSSS
S
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   400.........410.........420.. .......430.........440.........450.........460...
 
   639640.........650.....
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Query Sequence  . . PVITAVWQGPAHGLCVF
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Template Conservation      
     
   
  
 
Template Sequence  INADGWGNFSVNGGSVSIW
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TTS
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   464.....470.........480..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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