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Job DescriptionP15067
Confidence98.19%DateThu Jan 5 11:34:29 GMT 2012
Rank127Aligned Residues315
% Identity12%Templatec1uasA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of rice alpha-galactosidase
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   181........190 .........200.........210.........220.........230.........240.........250.....
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Query Sequence  HPVMINYLKQ. . . . . LGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAG
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Template Sequence  IRETADALVNTGLAKLGYQYVNIDDCWAEYSRDS. . . . . . . . . QGNFVPN. . . . RQTFPSG. . . . . . . IKALADYVHAKG
Template Known Secondary structure  TST



SS
B
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T.........TS


B
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TT
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   28.30.........40.........50.........60. ....... .70..... ....80.......
 
   256...260.........270.........280.........290.........300.........310.........320.........330.....
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Query Sequence  IEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRF
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Template Sequence  LKLGIYSDAGSQT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . CSNKMPGSLDHEEQDVKTFASW. GVDYLKY
Template Known Secondary structure 
SSSB
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TT
.T

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   88.90.........100 .........110.........120.. .......
 
   336...340.........350.........360.........370.........380.........390.........400.........410.....
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Query Sequence  DLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEWNDHFRDAARRFWLHYDLPLGAFA
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Template Sequence  DNC. NDAGRSVMERYTRMSNAMKT. . YGKNIFFSLCEWGKENPATWAGRMGNSWRTTGDI. . . . . . . . . . . . ADNWGSMT
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TT

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TTSSTTTT
GGGTGGGT
S
SS

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SS
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   130.. .......140.........150.. .......160.........170.........180...... ...190....
 
   416...420.........430.........440.........450.........460.........470.........480.........490.....
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Query Sequence  GRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDS
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Template Conservation               
     
 
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Template Sequence  SRADENDQWAAYAGPGGWNDPDML. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EVGNGGMSEAEYR
Template Known Secondary structure  TTGGG
BTTB



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TTSSSS
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   195....200.........210........ .220.........230.
 
   496...500.........510.........520.........530.........540.........550. ........560.........570...
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Query Sequence  IHALLTTLLLSQGTPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSGLTAFT. . AALIHLRKRIPALVENRWWEEG
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Template Sequence  SHFSIWALA. . . KAPLLIGC. . . . . . . . . . . . . . . . . . . . . . . DVRSMSQQTKNILSNSEVIAVNQDSLGVQGKKVQSDN
Template Known Secondary structure  T...T


S.......................
TTS

T
T
TT



T
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   232.......240 ........ .250.........260.........270.........280.....
 
   574.....580.........590.........600.........610.........620. ........630.. .......640....
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Query Sequence  DGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIV. . . . . . . LPAGEWHAIPP. . FAGEDNPVITAV
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Template Sequence  GLEVWAGPLSNN. . . . . . . . . . . . . . . . . . . RKAVVLWNRQSYQATITAHWSNIGLAGSVAVTARDLWAHSSFAAQGQIS
Template Known Secondary structure  T
STT...................

SSS
GGGTT

TT
TTTTS
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   286...290....... ..300.........310.........320.........330.........340......
 
   645....650......
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Query Sequence  WQGPAHGLCVFQ
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Template Sequence  ASVAPHDCKMYV
Template Known Secondary structure 
TT
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   347..350........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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