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Job DescriptionP15067
Confidence100.00%DateThu Jan 5 11:34:29 GMT 2012
Rank83Aligned Residues369
% Identity17%Templatec1jdaA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:1,4-alpha maltotetrahydrolase; PDBTitle: maltotetraose-forming exo-amylase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EAHVKGLTYLHPEIPVEIRGT. YKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAY
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Template Sequence  EIILQGFHWN. . . VVREAPNDWYNIL. . RQQAATIAADGFSAIWMPVPWRDFSSWSDGSK. SGGGEGYFWHDF. NKNGRY
Template Known Secondary structure 




TT...STTT..TT
S


S




B
SSS
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B

SSTT


S.


SSS
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   17..20...... ...30......... 40.........50.........60.........70. ........80... ......
 
   234.....240.........250.........260.........270.........280.........290.... .....300.......
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Query Sequence  ACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDG. . . . . . DYHNWTGCGNTLN
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Template Sequence  GS. . . . . DAQLRQAASALGGAGVKVLYDVVPNHMNRGYPDKEINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGDADLN
Template Known Secondary structure 

.....TT

TTB

TT
SS
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SSSS
BGGGS


SSS
BTTBSS

STTSSSBB
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   90. ........100.........110.........120.........130.........140.........150.........160....
 
   308.310.........320.........330.........340.........350.........360.........370.........380.......
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Query Sequence  LSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPP
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Template Sequence  TGHPQVYGMFRDEFTNLRSQYGAGGFRFDFVRGYAPERVNSWMTDS. . . . . . . . . ADNSFCVGQLWKGPSEYPNWDWRNT
Template Known Secondary structure  TTSS
S
GGGS
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TTS




GGGS
TTSGGGS
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   165....170.........180.........190.........200.........210 .........220.........230.....
 
   388. 390.........400.........410.........420.........430.........440.........450...
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Query Sequence  LF. . . . . . . . . . . . . . AEWNDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDCVCF
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Template Sequence  ASWQQIIKDWSDRAKCPVFDFALKERMQNGSIADWKHGLNG. . . . . . . . . . . NPDPRWREVAVTFVDNHDTGYSPGQNGG
Template Known Secondary structure  S

S

S
GGGGGGSGGG...........
SSTT
S

TTTS

SSGGG
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   236...240.........250.........260.........270...... ...280.........290.........300....
 
   454.....460.........470.........480.........490.........500.........510.........520.........530...
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Query Sequence  NHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQGTPMLLAGDEHGHSQHGNNNAYCQDN
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Template Sequence  QHHWALQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DGLIRQAYAYILTSPGTPVVYWDHMYDWG. . . . . . . . . . . .
Template Known Secondary structure 

SS


................................GGGSSSTSS............
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   305....310. ........320.........330.........340
 
   534.....540.........550.........560.........570.........580.........590.........600.........610...
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Query Sequence  QLTWLDWSQASSGLTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINA
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Template Sequence  . . . . . . . . . . . . . YGDFIRQLIQVRRAAGVRADSAIS. . . . . . . . . . . . . . . . . . . FHSGYSGLVATVSGSQQTLVVALN
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T

TT
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TTSSS
SS
S
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   341........350.........360.... .....370.........380........
 
   614.....620.........630.
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Query Sequence  TLEVTEIVLPAGEWHAIP
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Template Sequence  SDLGNPGQVASGSFSEAV
Template Known Secondary structure 




GGGT

S


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   389390.........400......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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