Job Description P76481 Confidence 99.96% Date Thu Jan 5 12:23:23 GMT 2012 Rank 2 Aligned Residues 185 % Identity 21% Template c2ok5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:complement factor b; PDBTitle: human complement factor b Resolution 2.30 Å

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		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.																							.	.
Query SS confidence																																														.	.	.																							.	.
Query Sequence		A	K	D	R	K	S	E	E	L	P	A	S	N	L	V	F	L	I	D	T	S	G	S	M	I	S	D	E	R	L	P	L	I	Q	S	S	L	K	L	L	V	K	E	L	.	.	.	R	E	Q	D	N	I	A	I	V	T	Y	A	G	D	S	R	I	A	L	P	S	I	.	.	S	G	S	H	K	A	E	I	N
Query Conservation																																														.	.	.																							.	.
Alig confidence																														.																.	.	.																							.	.
Template Conservation																														.
Template Sequence		K	R	K	I	V	L	D	P	S	G	S	M	N	I	Y	L	V	L	D	G	S	D	S	I	G	A	S	N	.	F	T	G	A	K	K	C	L	V	N	L	I	E	K	V	A	S	Y	G	V	K	P	R	Y	G	L	V	T	Y	A	T	Y	P	K	I	W	V	K	V	S	E	A	D	S	S	N	A	D	W	V	T
Template Known Secondary structure									T	T												S	S	S	T	T				.																	T	T	T											S	S	S							T	T	S	T	T	T	T
Template Predicted Secondary structure																														.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.				.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.										340	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.																													.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.																													.	.	.	.	.	.	.	.	.
Query Sequence		A	A	I	D	S	L	D	A	E	G	S	T	N	G	G	A	G	L	E	L	A	Y	Q	Q	A	T	K	G	F	I	K	G	G	.	.	.	I	N	R	I	L	L	A	T	D	G	D	F	N	V	G	I	D	D	P	K	S	I	E	S	M	V	K	K	.	.	.	.	.	.	.	.	.	Q	R	E	S	G	V	T
Query Conservation																																			.	.	.																													.	.	.	.	.	.	.	.	.
Alig confidence												.																							.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		K	Q	L	N	E	I	N	Y	E	G	.	T	N	T	K	K	A	L	Q	A	V	Y	S	M	M	S	W	V	P	P	E	G	W	N	R	T	R	H	V	I	I	L	M	T	D	G	L	H	N	M	G	G	D	P	I	T	V	I	D	E	I	R	D	L	L	Y	I	G	K	D	R	K	N	P	R	E	D	Y	L	D
Template Known Secondary structure						T						.	B																			T	T	G	G	G										S				B		S	S		T											T	T		S	S		T	T				G	G	G
Template Predicted Secondary structure												.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		L	S	T	F	G	V	G	N	S	N	Y	N	E	A	M	M	V	R	I	A	D	V	G	N	G	.	.	N	Y	S	Y	I	D	T	L	S	E	A	Q	K	V	L	N	S	E	M	R
Query Conservation																											.	.
Alig confidence										.																	.	.
Template Conservation										.
Template Sequence		V	Y	V	F	G	V	G	P	.	L	V	N	Q	V	N	I	N	A	L	A	S	K	K	D	N	E	Q	H	V	F	K	V	K	D	M	E	N	L	E	D	V	F	Y	Q	M	I	D
Template Known Secondary structure								S	T	.	T	S									S				T	T								S
Template Predicted Secondary structure										.
Template SS confidence
		400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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