Job Description P76481 Confidence 99.71% Date Thu Jan 5 12:23:23 GMT 2012 Rank 28 Aligned Residues 140 % Identity 16% Template c2nvoA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:ro sixty-related protein, rsr; PDBTitle: crystal structure of deinococcus radiodurans ro (rsr) protein Resolution 1.89 Å

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		E	L	P	A	S	N	L	V	F	L	I	D	T	S	G	S	M	I	S	D	E	.	.	.	.	.	R	L	P	L	I	Q	S	S	L	K	L	L	V	K	E	L	R	E	Q	D	N	I	A	I	V	T	Y	A	G	D	S	R	I	A	L	P	S	I	S	G	S	H	K	A	E	I	N	A	A	I	D	S	L	D
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.																																	.
Template Conservation																																																												.
Template Sequence		Q	P	A	N	T	R	H	L	L	A	L	D	V	S	G	S	M	T	C	G	D	V	A	G	V	P	G	L	T	P	N	M	A	A	A	A	M	S	L	I	A	L	R	T	E	P	D	A	L	T	M	G	F	A	E	Q	F	R	.	P	L	G	I	T	P	R	D	T	L	E	S	A	M	Q	K	A	Q	S	V	S
Template Known Secondary structure						S									S	G	G	G	G	S			G	G	G		T	T																		S	S								B	S	S			.						T	T										T			S	S
Template Predicted Secondary structure																																																												.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.		.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	G	S	T	N	G	G	A	G	L	E	L	A	Y	Q	Q	A	T	K	G	F	I	K	G	G	I	N	R	I	L	L	A	T	D	G	D	F	N	V	G	I	D	D	P	K	S	I	E	S	M	V	K	K	Q	R	E	S	G	V	T	L	S	T	F	G	V	G	N	S	N	Y	N
Query Conservation
Alig confidence		.																.	.	.	.	.	.
Template Conservation		.																.	.	.	.	.	.
Template Sequence		.	F	G	G	T	D	C	A	Q	P	I	L	W	A	A	Q	.	.	.	.	.	.	E	R	L	D	V	D	T	F	V	V	Y	T	D	N	E	T	W	A	G	Q	V	H	P	T	V	A	L	D	Q	Y	A	Q	K	M	G	R	A	P	K	L	I	V	V	G	L	T	A	T	E	F	S
Template Known Secondary structure		.	B					T	T									.	.	.	.	.	.	T	T				S							S	S						S	S														S										T	T		S
Template Predicted Secondary structure		.																.	.	.	.	.	.
Template SS confidence
			435	.	.	.	.	440	.	.	.	.	.	.	.	.	.							450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions