Job Description P76481 Confidence 98.99% Date Thu Jan 5 12:23:23 GMT 2012 Rank 44 Aligned Residues 134 % Identity 16% Template c1yvrA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:60-kda ss-a/ro ribonucleoprotein; PDBTitle: ro autoantigen Resolution 1.95 Å

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		E	L	P	A	S	N	L	V	F	L	I	D	T	S	G	S	M	I	S	.	.	.	D	E	R	L	P	L	I	Q	S	S	L	K	L	L	V	K	E	L	R	E	Q	D	N	I	A	I	V	T	Y	A	G	D	S	R	I	A	L	P	S	I	S	G	S	H	K	A	E	I	N	A	A	I	D	S	L	D	A	E
Query Conservation																					.	.	.
Alig confidence																					.	.	.																																				.																					.
Template Conservation																																																											.																					.
Template Sequence		E	P	T	G	K	R	F	L	L	A	I	D	V	S	A	S	M	N	Q	R	V	L	G	S	I	L	N	A	S	V	V	A	A	A	M	C	M	L	V	A	R	T	E	K	D	S	H	M	V	A	F	S	D	E	M	L	P	.	C	P	I	T	V	N	M	L	L	H	E	V	V	E	K	M	S	D	I	T	.	M
Template Known Secondary structure															S	G	G	G	G	S	B	S	T	T	S	S		B																	S	S							S	S	S				.		S			T	T	S										T	T			.
Template Predicted Secondary structure																																																											.																					.
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.		.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	T	N	G	G	A	G	L	E	L	A	Y	Q	Q	A	T	K	G	F	I	K	G	G	I	N	R	I	L	L	A	T	D	G	D	F	N	V	G	I	D	D	P	K	S	I	E	S	M	V	K	K	Q	R	E	S	G	V	T	L	S	T	F	G	V
Query Conservation
Alig confidence																.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.
Template Sequence		G	S	T	D	C	A	L	P	M	L	W	A	Q	K	.	.	.	.	.	.	T	N	T	A	A	D	I	F	I	V	F	T	D	C	E	T	N	V	E	D	V	H	P	A	T	A	L	K	Q	Y	R	E	K	M	G	I	P	A	K	L	I	V	C	A	M
Template Known Secondary structure		S				T	T									.	.	.	.	.	.	T	T				S												S	S	S															T
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		443	.	.	.	.	.	.	450	.	.	.	.	.	.							.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions