Job Description P76481 Confidence 99.96% Date Thu Jan 5 12:23:23 GMT 2012 Rank 1 Aligned Residues 180 % Identity 20% Template c1rs0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:complement factor b; PDBTitle: crystal structure analysis of the bb segment of factor b2 complexed with di-isopropyl-phosphate (dip) Resolution 2.60 Å

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																				.	.	.																									.	.															.	.	.
Query SS confidence																																				.	.	.																									.	.															.	.	.
Query Sequence		A	S	N	L	V	F	L	I	D	T	S	G	S	M	I	S	D	E	R	L	P	L	I	Q	S	S	L	K	L	L	V	K	E	L	.	.	.	R	E	Q	D	N	I	A	I	V	T	Y	A	G	D	S	R	I	A	L	P	S	I	S	G	.	.	S	H	K	A	E	I	N	A	A	I	D	S	L	D	.	.	.
Query Conservation																																				.	.	.																									.	.															.	.	.
Alig confidence																				.																.	.	.																									.	.															.	.	.
Template Conservation																				.
Template Sequence		S	M	N	I	Y	L	V	L	D	G	S	D	S	I	G	A	S	N	.	F	T	G	A	K	K	V	L	V	N	L	I	E	K	V	A	S	Y	G	V	K	P	R	Y	G	L	V	T	Y	A	T	Y	P	K	I	W	V	K	V	S	E	A	D	S	S	N	A	D	W	V	T	K	Q	L	N	E	I	N	Y	E	D
Template Known Secondary structure												S	T	T	T					.																		T	T											S	S	S							T	T	S	G	G	G	G														G	G	G
Template Predicted Secondary structure																				.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
				286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.									340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure		.	.																																																							.	.	.	.	.	.	.	.
Query SS confidence		.	.																																																							.	.	.	.	.	.	.	.
Query Sequence		.	.	A	E	G	S	T	N	G	G	A	G	L	E	L	A	Y	Q	Q	A	T	K	G	F	I	K	G	G	I	N	R	I	L	L	A	T	D	G	D	F	N	V	G	I	D	D	P	K	S	I	E	S	M	V	K	K	.	.	.	.	.	.	.	.	Q	R	E	S	G	V	T	L	S	T	F	G	V	G	N	S
Query Conservation		.	.																																																							.	.	.	.	.	.	.	.
Alig confidence		.	.																																																							.	.	.	.	.	.	.	.																.
Template Conservation																																																																																	.
Template Sequence		H	K	L	K	S	G	T	N	T	K	K	A	L	Q	A	V	Y	S	M	M	S	W	P	G	W	N	R	T	R	H	V	I	I	L	M	T	D	G	L	H	N	M	G	G	D	P	I	T	V	I	D	E	I	R	D	L	L	Y	I	G	K	D	R	N	P	R	E	D	Y	L	D	V	Y	V	F	G	V	G	P	.
Template Known Secondary structure		S			T	T																				G	G	G											S				S	S	S		T											T	T		S	S						G	G	G									S	S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.			.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		N	Y	N	E	A	M	M	V	R	I	A	D	V	G	N	G	N	.	.	Y	S	Y	I	D	T	L	S	E	A	Q	K	V	L	N	S	E	M	R	Q	M	L	I
Query Conservation																			.	.
Alig confidence																			.	.
Template Conservation
Template Sequence		L	V	N	Q	V	N	I	N	A	L	A	S	K	K	D	N	E	Q	H	V	C	K	V	K	D	M	E	C	L	E	D	V	F	Y	Q	M	I	D	E	S	Q	S
Template Known Secondary structure		S										S				T	T							T	T													S		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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