Job Description P0ACY9 Confidence 7.92% Date Thu Jan 5 11:19:27 GMT 2012 Rank 28 Aligned Residues 74 % Identity 26% Template c1qs2A_ PDB info PDB header:toxin Chain: A: PDB Molecule:adp-ribosyltransferase; PDBTitle: crystal structure of vip2 with nad Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.											.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.						.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.						.	.
Query Sequence		V	E	V	K	Y	V	V	I	R	E	G	E	E	K	.	.	.	.	.	.	.	.	.	.	M	S	F	T	S	.	.	K	K	E	A	D	A	Y	D	K	M	L	D	T	A	D	L	L	D	T	W	L	T	N	S	P	V	Q	M	E	D	E	Q	R	E	A	L	S	L	W	L	A	E	Q	K	D	V	L	S	T
Query Conservation																.	.	.	.	.	.	.	.	.	.						.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.						.	.										.	.	.	.	.										.	.	.	.
Template Conservation																																										.	.	.	.	.										.	.	.	.
Template Sequence		V	D	K	V	S	K	V	V	K	K	G	V	E	C	L	Q	I	E	G	T	L	K	K	S	L	D	F	K	N	D	I	N	A	E	A	H	S	W	G	M	.	.	.	.	.	K	N	Y	E	E	W	A	K	D	.	.	.	.	L	T	D	S	Q	R	E	A	L	D	G	Y	A	R	Q	D	Y	K	E	I	N	N
Template Known Secondary structure											T	T														B			T	T		T	T									.	.	.	.	.									T	.	.	.	.	S														T	T
Template Predicted Secondary structure																																										.	.	.	.	.										.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290					.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	K	T	G	K	L	P	S	P	Q	V	V	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	R	N	Q	G	G	S	G	N	E	K	L	D	A
Template Known Secondary structure						S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions