Return to main results Retrieve Phyre Job Id

Job DescriptionP56979
Confidence99.87%DateThu Jan 5 12:06:28 GMT 2012
Rank9Aligned Residues193
% Identity11%Templated1p7da_
SCOP infoDNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Lambda integrase-like, catalytic core
Resolution2.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50....... ..60.........70.........80....
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Query Sequence  LQNSPERVSLLPIAPGVDFATALSLRRMATSTGATPAYLLAPEVSALLFYM. . PDQRHHMLFATLWNTGMRIGEARMLTP
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Template Sequence  AFREAIAEGHITTNHVAA. . . . . . . . TRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKW
Template Known Secondary structure  TTS
S

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GGGS



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   150.........160....... ..170.........180.........190.........200.........210.........220.
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  ESFDLDGVRPFVRILSEKVRARRGRPPKDEVRLVPLTDISYVRQMESWMITTRPRRREPLWAVTDETMRNWLKQAVRRAE
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Template Sequence  SDIVDGYLYVEQ. . . . . . SKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKA
Template Known Secondary structure  GGB
SS
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TT
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SSBSSB
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   222.......230... ......240.........250.........260.........270.........280.........290.....
 
   165....170.........180.........190.........200.........210....
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Query Sequence  ADGVHFSIPVTPHTFRHSYIMHMLYHRQPRKVIQALAGHRDPRSMEVYTR
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Template Sequence  SGLSFEGDPPTFHELRSLSAR. LYEKQISDKFAQHLLGHKSDTMASQRDD
Template Known Secondary structure  T


SSS


TT.T


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   296...300.........310...... ...320.........330.........340....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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