Job Description P56979 Confidence 19.56% Date Thu Jan 5 12:06:28 GMT 2012 Rank 24 Aligned Residues 135 % Identity 13% Template d1p4ea2 SCOP info DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Lambda integrase-like, catalytic core Resolution 2.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	M	L	F	A	T	L	W	N	T	G	M	R	I	G	E	A	R	M	L	T	P	E	S	F	D	L	D	G	V	R	P	F	V	R	I	L	S	E	K	V	R	A	R	R	G	R	P	P	K	D	E	V	R	L	V	P	L	T	D	I	S	Y	V	R	Q	M	E	S	W	M	I	T	T	R	P	R	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Q	F	L	F	L	A	T	F	I	N	C	G	R	F	S	D	I	K	N	V	D	P	K	S	F	K	L	V	Q	N	K	Y	L	G	V	I	I	Q	C	L	V	T	E	T	K	T	S	V	S	R	H	I	Y	F	F	S	A	R	G	R	I	D	P	L	V	Y	L	D	E	F	L	R	N	S	E	P	V	L	K
Template Known Secondary structure													T								T	B		G	G	G							T	T	T										S		T	T	S											S	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
				142	.	.	.	.	.	.	.	150							.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.										.	.	.	.	.	.																										.	.	.	.
Query SS confidence		.	.										.	.	.	.	.	.																										.	.	.	.
Query Sequence		.	.	E	P	L	W	A	V	T	D	E	.	.	.	.	.	.	T	M	R	N	W	L	K	Q	A	V	R	R	A	E	A	D	G	V	H	F	S	I	P	V	T	.	.	.	.	P	H	T	F	R	H	S	Y	I	M	H	M	L	Y	H	R	Q	P	R	K	V
Query Conservation		.	.										.	.	.	.	.	.																										.	.	.	.
Alig confidence		.	.										.	.	.	.	.	.																										.	.	.	.
Template Conservation
Template Sequence		R	V	N	R	T	G	N	S	S	S	N	K	Q	E	Y	Q	L	L	K	D	N	L	V	R	S	Y	N	K	A	L	K	K	N	A	P	Y	P	I	F	A	I	K	N	G	P	K	S	H	I	G	R	H	L	M	T	S	F	L	S	M	K	G	L	T	E	L	T
Template Known Secondary structure					S	S					S	S	S		S			S	S		T	T												T		S	S	G	G	G	G	S	T	T			S	S	T													T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions