Job Description P56979 Confidence 4.41% Date Thu Jan 5 12:06:28 GMT 2012 Rank 95 Aligned Residues 91 % Identity 14% Template d1k4ta2 SCOP info DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Eukaryotic DNA topoisomerase I, catalytic core Resolution 2.10

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		79	80	.	.	.	.	.	.	.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		A	R	M	L	T	P	E	S	F	D	L	.	.	.	.	.	.	D	G	V	R	P	F	V	R	I	L	S	E	K	V	R	A	R	R	G	R	P	P	K	D	E	V	R	L	V	P	L	T	D	I	S	Y	V	R	Q	M	E	S	W	M	I	T	T	R	P	R	R	R	E	P	L	W	A	V	T	D	E	T	M
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Sequence		C	C	S	L	R	V	E	H	I	N	L	H	P	E	L	D	G	Q	E	Y	V	V	E	F	D	F	L	G	K	D	S	I	R	Y	Y	.	.	.	.	.	.	.	.	.	N	K	V	P	V	E	K	R	V	F	K	N	L	Q	L	F	M	E	N	K	Q	P	E	D	D	L	F	.	.	.	.	.	D	R	L	N
Template Known Secondary structure		G	G	G		B	G	G	G								T	T												G	G	G					.	.	.	.	.	.	.	.	.																	T	T	T			T	T	S	B	S	S	.	.	.	.	.	T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template SS confidence
		504	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.										.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.						.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	W	L	K	Q	A	V	R	R	A	E	A	D	G	V	H	F	S	I	P	V	T	P	H	T	F	R	H	S	Y	I	M	H	M	L	Y	H
Query Conservation
Alig confidence														.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.
Template Sequence		T	G	I	L	N	K	H	L	Q	D	L	M	.	.	.	.	.	.	.	E	G	L	T	A	K	V	F	R	T	Y	N	A	S	I	T	L	Q	Q
Template Known Secondary structure													S	.	.	.	.	.	.	.	T	T			T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.								.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions